Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9995 | 30208;30209;30210 | chr2:178704387;178704386;178704385 | chr2:179569114;179569113;179569112 |
N2AB | 9678 | 29257;29258;29259 | chr2:178704387;178704386;178704385 | chr2:179569114;179569113;179569112 |
N2A | 8751 | 26476;26477;26478 | chr2:178704387;178704386;178704385 | chr2:179569114;179569113;179569112 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1060500554 | None | 0.999 | None | 0.883 | 0.437 | 0.676897640743 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
L/P | rs1060500554 | None | 0.999 | None | 0.883 | 0.437 | 0.676897640743 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
L/P | rs1060500554 | None | 0.999 | None | 0.883 | 0.437 | 0.676897640743 | gnomAD-4.0.0 | 6.40658E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 7.84412E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9562 | likely_pathogenic | 0.9642 | pathogenic | -2.042 | Highly Destabilizing | 0.967 | D | 0.542 | neutral | None | None | None | None | N |
L/C | 0.9738 | likely_pathogenic | 0.9798 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -2.205 | Highly Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
L/E | 0.994 | likely_pathogenic | 0.9946 | pathogenic | -2.184 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
L/F | 0.8228 | likely_pathogenic | 0.8619 | pathogenic | -1.55 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/G | 0.9913 | likely_pathogenic | 0.9927 | pathogenic | -2.397 | Highly Destabilizing | 0.998 | D | 0.862 | deleterious | None | None | None | None | N |
L/H | 0.9887 | likely_pathogenic | 0.9901 | pathogenic | -1.682 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/I | 0.3709 | ambiguous | 0.418 | ambiguous | -1.104 | Destabilizing | 0.956 | D | 0.477 | neutral | None | None | None | None | N |
L/K | 0.9894 | likely_pathogenic | 0.9896 | pathogenic | -1.399 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.4022 | ambiguous | 0.512 | ambiguous | -0.827 | Destabilizing | 0.923 | D | 0.443 | neutral | None | None | None | None | N |
L/N | 0.9951 | likely_pathogenic | 0.9956 | pathogenic | -1.295 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.9635 | likely_pathogenic | 0.9743 | pathogenic | -1.39 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
L/Q | 0.9705 | likely_pathogenic | 0.9761 | pathogenic | -1.507 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
L/R | 0.9799 | likely_pathogenic | 0.9804 | pathogenic | -0.796 | Destabilizing | 0.997 | D | 0.837 | deleterious | None | None | None | None | N |
L/S | 0.9907 | likely_pathogenic | 0.9922 | pathogenic | -1.858 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
L/T | 0.9649 | likely_pathogenic | 0.973 | pathogenic | -1.725 | Destabilizing | 0.995 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/V | 0.4917 | ambiguous | 0.577 | pathogenic | -1.39 | Destabilizing | 0.37 | N | 0.359 | neutral | None | None | None | None | N |
L/W | 0.9811 | likely_pathogenic | 0.9835 | pathogenic | -1.697 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/Y | 0.9918 | likely_pathogenic | 0.993 | pathogenic | -1.469 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.