Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9996 | 30211;30212;30213 | chr2:178704384;178704383;178704382 | chr2:179569111;179569110;179569109 |
N2AB | 9679 | 29260;29261;29262 | chr2:178704384;178704383;178704382 | chr2:179569111;179569110;179569109 |
N2A | 8752 | 26479;26480;26481 | chr2:178704384;178704383;178704382 | chr2:179569111;179569110;179569109 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.966 | None | 0.385 | 0.344 | 0.497086342495 | gnomAD-4.0.0 | 6.84327E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99649E-07 | 0 | 0 |
Q/R | None | None | 0.012 | None | 0.157 | 0.137 | 0.176091768786 | gnomAD-4.0.0 | 6.84327E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99649E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3034 | likely_benign | 0.3251 | benign | -0.213 | Destabilizing | 0.688 | D | 0.343 | neutral | None | None | None | None | N |
Q/C | 0.8446 | likely_pathogenic | 0.8719 | pathogenic | 0.146 | Stabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
Q/D | 0.4529 | ambiguous | 0.4854 | ambiguous | -0.034 | Destabilizing | 0.728 | D | 0.335 | neutral | None | None | None | None | N |
Q/E | 0.0846 | likely_benign | 0.0801 | benign | -0.049 | Destabilizing | 0.051 | N | 0.087 | neutral | None | None | None | None | N |
Q/F | 0.8268 | likely_pathogenic | 0.8607 | pathogenic | -0.327 | Destabilizing | 0.974 | D | 0.359 | neutral | None | None | None | None | N |
Q/G | 0.3706 | ambiguous | 0.3873 | ambiguous | -0.425 | Destabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | N |
Q/H | 0.2821 | likely_benign | 0.329 | benign | -0.308 | Destabilizing | 0.028 | N | 0.185 | neutral | None | None | None | None | N |
Q/I | 0.597 | likely_pathogenic | 0.6289 | pathogenic | 0.264 | Stabilizing | 0.974 | D | 0.376 | neutral | None | None | None | None | N |
Q/K | 0.0987 | likely_benign | 0.0965 | benign | 0.002 | Stabilizing | 0.012 | N | 0.092 | neutral | None | None | None | None | N |
Q/L | 0.2173 | likely_benign | 0.2337 | benign | 0.264 | Stabilizing | 0.801 | D | 0.357 | neutral | None | None | None | None | N |
Q/M | 0.5393 | ambiguous | 0.5699 | pathogenic | 0.445 | Stabilizing | 0.991 | D | 0.367 | neutral | None | None | None | None | N |
Q/N | 0.3625 | ambiguous | 0.4038 | ambiguous | -0.318 | Destabilizing | 0.842 | D | 0.311 | neutral | None | None | None | None | N |
Q/P | 0.3091 | likely_benign | 0.3168 | benign | 0.134 | Stabilizing | 0.966 | D | 0.385 | neutral | None | None | None | None | N |
Q/R | 0.1203 | likely_benign | 0.1253 | benign | 0.147 | Stabilizing | 0.012 | N | 0.157 | neutral | None | None | None | None | N |
Q/S | 0.3325 | likely_benign | 0.3687 | ambiguous | -0.31 | Destabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
Q/T | 0.2923 | likely_benign | 0.3073 | benign | -0.166 | Destabilizing | 0.842 | D | 0.352 | neutral | None | None | None | None | N |
Q/V | 0.4091 | ambiguous | 0.4421 | ambiguous | 0.134 | Stabilizing | 0.915 | D | 0.365 | neutral | None | None | None | None | N |
Q/W | 0.6807 | likely_pathogenic | 0.7147 | pathogenic | -0.294 | Destabilizing | 0.998 | D | 0.375 | neutral | None | None | None | None | N |
Q/Y | 0.6407 | likely_pathogenic | 0.6966 | pathogenic | -0.047 | Destabilizing | 0.949 | D | 0.377 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.