Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9998 | 30217;30218;30219 | chr2:178704378;178704377;178704376 | chr2:179569105;179569104;179569103 |
N2AB | 9681 | 29266;29267;29268 | chr2:178704378;178704377;178704376 | chr2:179569105;179569104;179569103 |
N2A | 8754 | 26485;26486;26487 | chr2:178704378;178704377;178704376 | chr2:179569105;179569104;179569103 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1359452427 | -0.558 | 0.989 | None | 0.493 | 0.371 | 0.622397550212 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2788 | likely_benign | 0.2715 | benign | -1.355 | Destabilizing | 0.267 | N | 0.32 | neutral | None | None | None | None | N |
V/C | 0.8693 | likely_pathogenic | 0.8897 | pathogenic | -0.732 | Destabilizing | 0.998 | D | 0.467 | neutral | None | None | None | None | N |
V/D | 0.5305 | ambiguous | 0.4811 | ambiguous | -1.444 | Destabilizing | 0.842 | D | 0.517 | neutral | None | None | None | None | N |
V/E | 0.4023 | ambiguous | 0.3521 | ambiguous | -1.492 | Destabilizing | 0.801 | D | 0.476 | neutral | None | None | None | None | N |
V/F | 0.2566 | likely_benign | 0.2506 | benign | -1.206 | Destabilizing | 0.974 | D | 0.495 | neutral | None | None | None | None | N |
V/G | 0.4083 | ambiguous | 0.4185 | ambiguous | -1.623 | Destabilizing | 0.669 | D | 0.497 | neutral | None | None | None | None | N |
V/H | 0.7146 | likely_pathogenic | 0.7082 | pathogenic | -1.294 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
V/I | 0.088 | likely_benign | 0.0871 | benign | -0.733 | Destabilizing | 0.688 | D | 0.473 | neutral | None | None | None | None | N |
V/K | 0.4336 | ambiguous | 0.386 | ambiguous | -1.252 | Destabilizing | 0.067 | N | 0.333 | neutral | None | None | None | None | N |
V/L | 0.3268 | likely_benign | 0.3127 | benign | -0.733 | Destabilizing | 0.454 | N | 0.403 | neutral | None | None | None | None | N |
V/M | 0.1655 | likely_benign | 0.1616 | benign | -0.43 | Destabilizing | 0.989 | D | 0.493 | neutral | None | None | None | None | N |
V/N | 0.3998 | ambiguous | 0.3854 | ambiguous | -0.902 | Destabilizing | 0.842 | D | 0.513 | neutral | None | None | None | None | N |
V/P | 0.9687 | likely_pathogenic | 0.9735 | pathogenic | -0.906 | Destabilizing | 0.974 | D | 0.505 | neutral | None | None | None | None | N |
V/Q | 0.4293 | ambiguous | 0.4075 | ambiguous | -1.137 | Destabilizing | 0.949 | D | 0.499 | neutral | None | None | None | None | N |
V/R | 0.4126 | ambiguous | 0.3826 | ambiguous | -0.661 | Destabilizing | 0.728 | D | 0.522 | neutral | None | None | None | None | N |
V/S | 0.3574 | ambiguous | 0.3571 | ambiguous | -1.288 | Destabilizing | 0.067 | N | 0.338 | neutral | None | None | None | None | N |
V/T | 0.2148 | likely_benign | 0.2083 | benign | -1.243 | Destabilizing | 0.01 | N | 0.114 | neutral | None | None | None | None | N |
V/W | 0.9183 | likely_pathogenic | 0.9205 | pathogenic | -1.39 | Destabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | N |
V/Y | 0.7176 | likely_pathogenic | 0.7173 | pathogenic | -1.127 | Destabilizing | 0.991 | D | 0.508 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.