Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10000 | 30223;30224;30225 | chr2:178704372;178704371;178704370 | chr2:179569099;179569098;179569097 |
N2AB | 9683 | 29272;29273;29274 | chr2:178704372;178704371;178704370 | chr2:179569099;179569098;179569097 |
N2A | 8756 | 26491;26492;26493 | chr2:178704372;178704371;178704370 | chr2:179569099;179569098;179569097 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs768379279 | -1.533 | 0.989 | None | 0.56 | 0.557 | 0.865652480908 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.31E-05 | 0 |
L/P | rs768379279 | -1.533 | 0.989 | None | 0.56 | 0.557 | 0.865652480908 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs768379279 | -1.533 | 0.989 | None | 0.56 | 0.557 | 0.865652480908 | gnomAD-4.0.0 | 9.29481E-06 | None | None | None | None | N | None | 0 | 1.66633E-05 | None | 0 | 0 | None | 0 | 0 | 1.18665E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4103 | ambiguous | 0.4405 | ambiguous | -2.149 | Highly Destabilizing | 0.525 | D | 0.374 | neutral | None | None | None | None | N |
L/C | 0.5638 | ambiguous | 0.6147 | pathogenic | -1.343 | Destabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | N |
L/D | 0.9466 | likely_pathogenic | 0.9608 | pathogenic | -1.917 | Destabilizing | 0.974 | D | 0.573 | neutral | None | None | None | None | N |
L/E | 0.6845 | likely_pathogenic | 0.7303 | pathogenic | -1.85 | Destabilizing | 0.974 | D | 0.581 | neutral | None | None | None | None | N |
L/F | 0.2196 | likely_benign | 0.2619 | benign | -1.414 | Destabilizing | 0.037 | N | 0.221 | neutral | None | None | None | None | N |
L/G | 0.734 | likely_pathogenic | 0.791 | pathogenic | -2.549 | Highly Destabilizing | 0.007 | N | 0.299 | neutral | None | None | None | None | N |
L/H | 0.5069 | ambiguous | 0.5799 | pathogenic | -1.811 | Destabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
L/I | 0.1347 | likely_benign | 0.1329 | benign | -1.071 | Destabilizing | 0.016 | N | 0.209 | neutral | None | None | None | None | N |
L/K | 0.525 | ambiguous | 0.5834 | pathogenic | -1.592 | Destabilizing | 0.974 | D | 0.523 | neutral | None | None | None | None | N |
L/M | 0.1402 | likely_benign | 0.153 | benign | -0.85 | Destabilizing | 0.934 | D | 0.493 | neutral | None | None | None | None | N |
L/N | 0.8186 | likely_pathogenic | 0.8647 | pathogenic | -1.499 | Destabilizing | 0.974 | D | 0.571 | neutral | None | None | None | None | N |
L/P | 0.9605 | likely_pathogenic | 0.956 | pathogenic | -1.403 | Destabilizing | 0.989 | D | 0.56 | neutral | None | None | None | None | N |
L/Q | 0.3104 | likely_benign | 0.3688 | ambiguous | -1.617 | Destabilizing | 0.989 | D | 0.515 | neutral | None | None | None | None | N |
L/R | 0.3908 | ambiguous | 0.4448 | ambiguous | -1.02 | Destabilizing | 0.966 | D | 0.517 | neutral | None | None | None | None | N |
L/S | 0.5737 | likely_pathogenic | 0.6279 | pathogenic | -2.146 | Highly Destabilizing | 0.728 | D | 0.463 | neutral | None | None | None | None | N |
L/T | 0.4571 | ambiguous | 0.5044 | ambiguous | -1.962 | Destabilizing | 0.067 | N | 0.234 | neutral | None | None | None | None | N |
L/V | 0.1103 | likely_benign | 0.1088 | benign | -1.403 | Destabilizing | 0.012 | N | 0.154 | neutral | None | None | None | None | N |
L/W | 0.5371 | ambiguous | 0.5899 | pathogenic | -1.59 | Destabilizing | 0.998 | D | 0.485 | neutral | None | None | None | None | N |
L/Y | 0.6031 | likely_pathogenic | 0.6614 | pathogenic | -1.369 | Destabilizing | 0.904 | D | 0.505 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.