Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10001 | 30226;30227;30228 | chr2:178704369;178704368;178704367 | chr2:179569096;179569095;179569094 |
N2AB | 9684 | 29275;29276;29277 | chr2:178704369;178704368;178704367 | chr2:179569096;179569095;179569094 |
N2A | 8757 | 26494;26495;26496 | chr2:178704369;178704368;178704367 | chr2:179569096;179569095;179569094 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs747230082 | 0.108 | 0.949 | None | 0.512 | 0.269 | 0.232513804876 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
K/N | rs747230082 | 0.108 | 0.949 | None | 0.512 | 0.269 | 0.232513804876 | gnomAD-4.0.0 | 3.18227E-06 | None | None | None | None | N | None | 0 | 2.28624E-05 | None | 0 | 0 | None | 0 | 0 | 2.8582E-06 | 0 | 0 |
K/R | None | None | 0.84 | None | 0.515 | 0.226 | 0.300449992093 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8494 | likely_pathogenic | 0.7711 | pathogenic | -0.121 | Destabilizing | 0.775 | D | 0.57 | neutral | None | None | None | None | N |
K/C | 0.9659 | likely_pathogenic | 0.9566 | pathogenic | -0.307 | Destabilizing | 0.996 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/D | 0.9654 | likely_pathogenic | 0.9425 | pathogenic | 0.034 | Stabilizing | 0.961 | D | 0.536 | neutral | None | None | None | None | N |
K/E | 0.6837 | likely_pathogenic | 0.5263 | ambiguous | 0.088 | Stabilizing | 0.84 | D | 0.545 | neutral | None | None | None | None | N |
K/F | 0.9784 | likely_pathogenic | 0.9655 | pathogenic | -0.011 | Destabilizing | 0.923 | D | 0.649 | neutral | None | None | None | None | N |
K/G | 0.9092 | likely_pathogenic | 0.8664 | pathogenic | -0.404 | Destabilizing | 0.961 | D | 0.581 | neutral | None | None | None | None | N |
K/H | 0.7602 | likely_pathogenic | 0.6971 | pathogenic | -0.649 | Destabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | N |
K/I | 0.8544 | likely_pathogenic | 0.7872 | pathogenic | 0.57 | Stabilizing | 0.018 | N | 0.503 | neutral | None | None | None | None | N |
K/L | 0.7702 | likely_pathogenic | 0.6828 | pathogenic | 0.57 | Stabilizing | 0.372 | N | 0.598 | neutral | None | None | None | None | N |
K/M | 0.6883 | likely_pathogenic | 0.5747 | pathogenic | 0.239 | Stabilizing | 0.979 | D | 0.541 | neutral | None | None | None | None | N |
K/N | 0.9102 | likely_pathogenic | 0.8512 | pathogenic | -0.044 | Destabilizing | 0.949 | D | 0.512 | neutral | None | None | None | None | N |
K/P | 0.8855 | likely_pathogenic | 0.8415 | pathogenic | 0.37 | Stabilizing | 0.987 | D | 0.551 | neutral | None | None | None | None | N |
K/Q | 0.4164 | ambiguous | 0.313 | benign | -0.148 | Destabilizing | 0.983 | D | 0.55 | neutral | None | None | None | None | N |
K/R | 0.1304 | likely_benign | 0.115 | benign | -0.296 | Destabilizing | 0.84 | D | 0.515 | neutral | None | None | None | None | N |
K/S | 0.9117 | likely_pathogenic | 0.8527 | pathogenic | -0.562 | Destabilizing | 0.633 | D | 0.525 | neutral | None | None | None | None | N |
K/T | 0.6454 | likely_pathogenic | 0.5283 | ambiguous | -0.335 | Destabilizing | 0.034 | N | 0.37 | neutral | None | None | None | None | N |
K/V | 0.8238 | likely_pathogenic | 0.7564 | pathogenic | 0.37 | Stabilizing | 0.372 | N | 0.589 | neutral | None | None | None | None | N |
K/W | 0.9696 | likely_pathogenic | 0.9545 | pathogenic | 0.022 | Stabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/Y | 0.9559 | likely_pathogenic | 0.9336 | pathogenic | 0.322 | Stabilizing | 0.961 | D | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.