Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10010 | 30253;30254;30255 | chr2:178704342;178704341;178704340 | chr2:179569069;179569068;179569067 |
N2AB | 9693 | 29302;29303;29304 | chr2:178704342;178704341;178704340 | chr2:179569069;179569068;179569067 |
N2A | 8766 | 26521;26522;26523 | chr2:178704342;178704341;178704340 | chr2:179569069;179569068;179569067 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 1.0 | None | 0.91 | 0.701 | 0.856695912731 | gnomAD-4.0.0 | 1.59085E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85747E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.9389 | likely_pathogenic | 0.9422 | pathogenic | -1.907 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | disulfide | None | N |
C/D | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | disulfide | None | N |
C/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | disulfide | None | N |
C/F | 0.9457 | likely_pathogenic | 0.954 | pathogenic | -1.183 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | disulfide | None | N |
C/G | 0.8899 | likely_pathogenic | 0.893 | pathogenic | -2.235 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | disulfide | None | N |
C/H | 0.9984 | likely_pathogenic | 0.9985 | pathogenic | -2.408 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | disulfide | None | N |
C/I | 0.9683 | likely_pathogenic | 0.9764 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | disulfide | None | N |
C/K | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.67 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | disulfide | None | N |
C/L | 0.9566 | likely_pathogenic | 0.9648 | pathogenic | -1.018 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | disulfide | None | N |
C/M | 0.9849 | likely_pathogenic | 0.9877 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | disulfide | None | N |
C/N | 0.9979 | likely_pathogenic | 0.998 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | disulfide | None | N |
C/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | disulfide | None | N |
C/Q | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.948 | deleterious | None | None | disulfide | None | N |
C/R | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -1.875 | Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | disulfide | None | N |
C/S | 0.956 | likely_pathogenic | 0.9574 | pathogenic | -2.412 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | disulfide | None | N |
C/T | 0.9751 | likely_pathogenic | 0.9769 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | disulfide | None | N |
C/V | 0.907 | likely_pathogenic | 0.9271 | pathogenic | -1.294 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | disulfide | None | N |
C/W | 0.996 | likely_pathogenic | 0.9967 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | disulfide | None | N |
C/Y | 0.9908 | likely_pathogenic | 0.9922 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.