Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10017 | 30274;30275;30276 | chr2:178704321;178704320;178704319 | chr2:179569048;179569047;179569046 |
N2AB | 9700 | 29323;29324;29325 | chr2:178704321;178704320;178704319 | chr2:179569048;179569047;179569046 |
N2A | 8773 | 26542;26543;26544 | chr2:178704321;178704320;178704319 | chr2:179569048;179569047;179569046 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.026 | None | 0.253 | 0.197 | 0.415820034956 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3613 | ambiguous | 0.4874 | ambiguous | -1.604 | Destabilizing | 0.026 | N | 0.347 | neutral | None | None | None | None | N |
V/C | 0.9063 | likely_pathogenic | 0.9372 | pathogenic | -0.846 | Destabilizing | 0.997 | D | 0.595 | neutral | None | None | None | None | N |
V/D | 0.9268 | likely_pathogenic | 0.9508 | pathogenic | -1.501 | Destabilizing | 0.988 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/E | 0.7835 | likely_pathogenic | 0.8373 | pathogenic | -1.384 | Destabilizing | 0.968 | D | 0.615 | neutral | None | None | None | None | N |
V/F | 0.6666 | likely_pathogenic | 0.7146 | pathogenic | -1.029 | Destabilizing | 0.976 | D | 0.631 | neutral | None | None | None | None | N |
V/G | 0.6167 | likely_pathogenic | 0.7044 | pathogenic | -2.017 | Highly Destabilizing | 0.938 | D | 0.638 | neutral | None | None | None | None | N |
V/H | 0.9502 | likely_pathogenic | 0.9653 | pathogenic | -1.487 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
V/I | 0.1365 | likely_benign | 0.1396 | benign | -0.51 | Destabilizing | 0.026 | N | 0.299 | neutral | None | None | None | None | N |
V/K | 0.8342 | likely_pathogenic | 0.8651 | pathogenic | -1.153 | Destabilizing | 0.976 | D | 0.613 | neutral | None | None | None | None | N |
V/L | 0.6179 | likely_pathogenic | 0.6565 | pathogenic | -0.51 | Destabilizing | 0.026 | N | 0.253 | neutral | None | None | None | None | N |
V/M | 0.4307 | ambiguous | 0.4939 | ambiguous | -0.395 | Destabilizing | 0.976 | D | 0.508 | neutral | None | None | None | None | N |
V/N | 0.8669 | likely_pathogenic | 0.9017 | pathogenic | -1.141 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/P | 0.9755 | likely_pathogenic | 0.9767 | pathogenic | -0.844 | Destabilizing | 0.988 | D | 0.641 | neutral | None | None | None | None | N |
V/Q | 0.7819 | likely_pathogenic | 0.834 | pathogenic | -1.146 | Destabilizing | 0.988 | D | 0.653 | neutral | None | None | None | None | N |
V/R | 0.7722 | likely_pathogenic | 0.8083 | pathogenic | -0.843 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/S | 0.6163 | likely_pathogenic | 0.7208 | pathogenic | -1.725 | Destabilizing | 0.952 | D | 0.583 | neutral | None | None | None | None | N |
V/T | 0.4719 | ambiguous | 0.5928 | pathogenic | -1.476 | Destabilizing | 0.919 | D | 0.545 | neutral | None | None | None | None | N |
V/W | 0.9866 | likely_pathogenic | 0.9897 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
V/Y | 0.9426 | likely_pathogenic | 0.9546 | pathogenic | -0.971 | Destabilizing | 0.996 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.