Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10018 | 30277;30278;30279 | chr2:178704318;178704317;178704316 | chr2:179569045;179569044;179569043 |
N2AB | 9701 | 29326;29327;29328 | chr2:178704318;178704317;178704316 | chr2:179569045;179569044;179569043 |
N2A | 8774 | 26545;26546;26547 | chr2:178704318;178704317;178704316 | chr2:179569045;179569044;179569043 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.171 | None | 0.366 | 0.304 | 0.457650129517 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4772 | ambiguous | 0.5005 | ambiguous | 0.009 | Stabilizing | 0.001 | N | 0.184 | neutral | None | None | None | None | N |
K/C | 0.9003 | likely_pathogenic | 0.9083 | pathogenic | -0.381 | Destabilizing | 0.864 | D | 0.307 | neutral | None | None | None | None | N |
K/D | 0.6895 | likely_pathogenic | 0.7048 | pathogenic | -0.16 | Destabilizing | 0.038 | N | 0.371 | neutral | None | None | None | None | N |
K/E | 0.2554 | likely_benign | 0.2503 | benign | -0.15 | Destabilizing | 0.001 | N | 0.152 | neutral | None | None | None | None | N |
K/F | 0.9085 | likely_pathogenic | 0.9078 | pathogenic | -0.268 | Destabilizing | 0.356 | N | 0.334 | neutral | None | None | None | None | N |
K/G | 0.6978 | likely_pathogenic | 0.7034 | pathogenic | -0.148 | Destabilizing | 0.072 | N | 0.363 | neutral | None | None | None | None | N |
K/H | 0.4644 | ambiguous | 0.4692 | ambiguous | -0.246 | Destabilizing | 0.356 | N | 0.357 | neutral | None | None | None | None | N |
K/I | 0.563 | ambiguous | 0.5634 | ambiguous | 0.347 | Stabilizing | 0.171 | N | 0.366 | neutral | None | None | None | None | N |
K/L | 0.5539 | ambiguous | 0.566 | pathogenic | 0.347 | Stabilizing | 0.072 | N | 0.361 | neutral | None | None | None | None | N |
K/M | 0.432 | ambiguous | 0.4363 | ambiguous | -0.114 | Destabilizing | 0.628 | D | 0.358 | neutral | None | None | None | None | N |
K/N | 0.5341 | ambiguous | 0.5388 | ambiguous | 0.071 | Stabilizing | 0.055 | N | 0.354 | neutral | None | None | None | None | N |
K/P | 0.5759 | likely_pathogenic | 0.6114 | pathogenic | 0.259 | Stabilizing | 0.136 | N | 0.404 | neutral | None | None | None | None | N |
K/Q | 0.1928 | likely_benign | 0.1879 | benign | -0.028 | Destabilizing | 0.002 | N | 0.191 | neutral | None | None | None | None | N |
K/R | 0.1153 | likely_benign | 0.1091 | benign | -0.018 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
K/S | 0.5573 | ambiguous | 0.575 | pathogenic | -0.297 | Destabilizing | 0.016 | N | 0.329 | neutral | None | None | None | None | N |
K/T | 0.26 | likely_benign | 0.2679 | benign | -0.156 | Destabilizing | 0.001 | N | 0.2 | neutral | None | None | None | None | N |
K/V | 0.5247 | ambiguous | 0.546 | ambiguous | 0.259 | Stabilizing | 0.072 | N | 0.387 | neutral | None | None | None | None | N |
K/W | 0.9141 | likely_pathogenic | 0.9031 | pathogenic | -0.377 | Destabilizing | 0.864 | D | 0.335 | neutral | None | None | None | None | N |
K/Y | 0.8201 | likely_pathogenic | 0.8152 | pathogenic | -0.022 | Destabilizing | 0.356 | N | 0.346 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.