Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10025 | 30298;30299;30300 | chr2:178704297;178704296;178704295 | chr2:179569024;179569023;179569022 |
N2AB | 9708 | 29347;29348;29349 | chr2:178704297;178704296;178704295 | chr2:179569024;179569023;179569022 |
N2A | 8781 | 26566;26567;26568 | chr2:178704297;178704296;178704295 | chr2:179569024;179569023;179569022 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 0.991 | None | 0.539 | 0.49 | 0.267299060538 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
G/V | None | None | 1.0 | None | 0.739 | 0.573 | 0.876304189171 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.626 | likely_pathogenic | 0.761 | pathogenic | -0.281 | Destabilizing | 0.998 | D | 0.48 | neutral | None | None | None | None | N |
G/C | 0.7545 | likely_pathogenic | 0.8728 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/D | 0.3529 | ambiguous | 0.5077 | ambiguous | -0.395 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
G/E | 0.4705 | ambiguous | 0.6557 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
G/F | 0.9641 | likely_pathogenic | 0.9826 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
G/H | 0.6407 | likely_pathogenic | 0.7812 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
G/I | 0.9449 | likely_pathogenic | 0.9758 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
G/K | 0.6097 | likely_pathogenic | 0.7337 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
G/L | 0.9416 | likely_pathogenic | 0.9704 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
G/M | 0.9453 | likely_pathogenic | 0.9742 | pathogenic | -0.498 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/N | 0.4119 | ambiguous | 0.5709 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
G/P | 0.9975 | likely_pathogenic | 0.9987 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
G/Q | 0.5181 | ambiguous | 0.6675 | pathogenic | -0.725 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
G/R | 0.4655 | ambiguous | 0.6117 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/S | 0.2136 | likely_benign | 0.3193 | benign | -0.687 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | N |
G/T | 0.742 | likely_pathogenic | 0.8534 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
G/V | 0.9112 | likely_pathogenic | 0.9601 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/W | 0.8754 | likely_pathogenic | 0.9325 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
G/Y | 0.8857 | likely_pathogenic | 0.9418 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.