Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10034 | 30325;30326;30327 | chr2:178704270;178704269;178704268 | chr2:179568997;179568996;179568995 |
N2AB | 9717 | 29374;29375;29376 | chr2:178704270;178704269;178704268 | chr2:179568997;179568996;179568995 |
N2A | 8790 | 26593;26594;26595 | chr2:178704270;178704269;178704268 | chr2:179568997;179568996;179568995 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | None | None | 0.007 | None | 0.453 | 0.216 | 0.0716867268079 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5254 | ambiguous | 0.4702 | ambiguous | -1.35 | Destabilizing | 0.001 | N | 0.429 | neutral | None | None | None | None | N |
H/C | 0.1574 | likely_benign | 0.1373 | benign | -0.622 | Destabilizing | 0.132 | N | 0.598 | neutral | None | None | None | None | N |
H/D | 0.7212 | likely_pathogenic | 0.629 | pathogenic | -1.094 | Destabilizing | 0.007 | N | 0.453 | neutral | None | None | None | None | N |
H/E | 0.6703 | likely_pathogenic | 0.5776 | pathogenic | -0.933 | Destabilizing | 0.004 | N | 0.397 | neutral | None | None | None | None | N |
H/F | 0.1731 | likely_benign | 0.1452 | benign | 0.286 | Stabilizing | None | N | 0.285 | neutral | None | None | None | None | N |
H/G | 0.6884 | likely_pathogenic | 0.6112 | pathogenic | -1.777 | Destabilizing | 0.004 | N | 0.485 | neutral | None | None | None | None | N |
H/I | 0.2201 | likely_benign | 0.2009 | benign | -0.122 | Destabilizing | 0.001 | N | 0.509 | neutral | None | None | None | None | N |
H/K | 0.6032 | likely_pathogenic | 0.4963 | ambiguous | -0.996 | Destabilizing | 0.002 | N | 0.437 | neutral | None | None | None | None | N |
H/L | 0.1643 | likely_benign | 0.1348 | benign | -0.122 | Destabilizing | 0.001 | N | 0.472 | neutral | None | None | None | None | N |
H/M | 0.4525 | ambiguous | 0.4256 | ambiguous | -0.366 | Destabilizing | 0.021 | N | 0.613 | neutral | None | None | None | None | N |
H/N | 0.2424 | likely_benign | 0.2195 | benign | -1.373 | Destabilizing | 0.007 | N | 0.359 | neutral | None | None | None | None | N |
H/P | 0.7697 | likely_pathogenic | 0.6892 | pathogenic | -0.515 | Destabilizing | 0.013 | N | 0.559 | neutral | None | None | None | None | N |
H/Q | 0.3593 | ambiguous | 0.2945 | benign | -1.003 | Destabilizing | 0.007 | N | 0.462 | neutral | None | None | None | None | N |
H/R | 0.3441 | ambiguous | 0.2483 | benign | -1.45 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
H/S | 0.4437 | ambiguous | 0.3888 | ambiguous | -1.474 | Destabilizing | 0.002 | N | 0.44 | neutral | None | None | None | None | N |
H/T | 0.4232 | ambiguous | 0.3758 | ambiguous | -1.191 | Destabilizing | None | N | 0.335 | neutral | None | None | None | None | N |
H/V | 0.1605 | likely_benign | 0.1516 | benign | -0.515 | Destabilizing | None | N | 0.387 | neutral | None | None | None | None | N |
H/W | 0.3059 | likely_benign | 0.2682 | benign | 0.752 | Stabilizing | 0.132 | N | 0.617 | neutral | None | None | None | None | N |
H/Y | 0.0588 | likely_benign | 0.0458 | benign | 0.697 | Stabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.