Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10042 | 30349;30350;30351 | chr2:178704246;178704245;178704244 | chr2:179568973;179568972;179568971 |
N2AB | 9725 | 29398;29399;29400 | chr2:178704246;178704245;178704244 | chr2:179568973;179568972;179568971 |
N2A | 8798 | 26617;26618;26619 | chr2:178704246;178704245;178704244 | chr2:179568973;179568972;179568971 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.983 | None | 0.73 | 0.319 | 0.674832526739 | gnomAD-4.0.0 | 6.84139E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99397E-07 | 0 | 0 |
V/L | None | None | 0.63 | None | 0.403 | 0.211 | 0.480801007081 | gnomAD-4.0.0 | 6.84139E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4125 | ambiguous | 0.512 | ambiguous | -1.703 | Destabilizing | 0.025 | N | 0.395 | neutral | None | None | None | None | N |
V/C | 0.9209 | likely_pathogenic | 0.9528 | pathogenic | -0.949 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/D | 0.6359 | likely_pathogenic | 0.711 | pathogenic | -2.315 | Highly Destabilizing | 0.983 | D | 0.787 | deleterious | None | None | None | None | N |
V/E | 0.4123 | ambiguous | 0.4644 | ambiguous | -2.302 | Highly Destabilizing | 0.975 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/F | 0.2921 | likely_benign | 0.3703 | ambiguous | -1.319 | Destabilizing | 0.983 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/G | 0.4938 | ambiguous | 0.6098 | pathogenic | -2.028 | Highly Destabilizing | 0.935 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/H | 0.7805 | likely_pathogenic | 0.8501 | pathogenic | -1.769 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
V/I | 0.0801 | likely_benign | 0.0835 | benign | -0.877 | Destabilizing | 0.099 | N | 0.353 | neutral | None | None | None | None | N |
V/K | 0.5582 | ambiguous | 0.6286 | pathogenic | -1.494 | Destabilizing | 0.975 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/L | 0.3381 | likely_benign | 0.4164 | ambiguous | -0.877 | Destabilizing | 0.63 | D | 0.403 | neutral | None | None | None | None | N |
V/M | 0.2119 | likely_benign | 0.2708 | benign | -0.514 | Destabilizing | 0.987 | D | 0.581 | neutral | None | None | None | None | N |
V/N | 0.4628 | ambiguous | 0.5693 | pathogenic | -1.313 | Destabilizing | 0.987 | D | 0.79 | deleterious | None | None | None | None | N |
V/P | 0.9893 | likely_pathogenic | 0.9942 | pathogenic | -1.122 | Destabilizing | 0.987 | D | 0.75 | deleterious | None | None | None | None | N |
V/Q | 0.4944 | ambiguous | 0.5675 | pathogenic | -1.486 | Destabilizing | 0.987 | D | 0.759 | deleterious | None | None | None | None | N |
V/R | 0.5372 | ambiguous | 0.6025 | pathogenic | -0.961 | Destabilizing | 0.987 | D | 0.791 | deleterious | None | None | None | None | N |
V/S | 0.4462 | ambiguous | 0.5548 | ambiguous | -1.692 | Destabilizing | 0.95 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/T | 0.3081 | likely_benign | 0.3859 | ambiguous | -1.594 | Destabilizing | 0.916 | D | 0.497 | neutral | None | None | None | None | N |
V/W | 0.9011 | likely_pathogenic | 0.9349 | pathogenic | -1.659 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/Y | 0.6987 | likely_pathogenic | 0.7762 | pathogenic | -1.387 | Destabilizing | 0.996 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.