Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10047 | 30364;30365;30366 | chr2:178704231;178704230;178704229 | chr2:179568958;179568957;179568956 |
N2AB | 9730 | 29413;29414;29415 | chr2:178704231;178704230;178704229 | chr2:179568958;179568957;179568956 |
N2A | 8803 | 26632;26633;26634 | chr2:178704231;178704230;178704229 | chr2:179568958;179568957;179568956 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1468010768 | None | 1.0 | None | 0.827 | 0.804 | 0.865251336291 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9566 | likely_pathogenic | 0.9787 | pathogenic | -2.775 | Highly Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/C | 0.991 | likely_pathogenic | 0.9965 | pathogenic | -2.42 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
I/D | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -3.615 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
I/E | 0.9969 | likely_pathogenic | 0.9974 | pathogenic | -3.451 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
I/F | 0.6463 | likely_pathogenic | 0.7405 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/G | 0.9975 | likely_pathogenic | 0.9986 | pathogenic | -3.265 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/H | 0.9945 | likely_pathogenic | 0.9966 | pathogenic | -2.636 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
I/K | 0.9916 | likely_pathogenic | 0.9933 | pathogenic | -2.315 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/L | 0.353 | ambiguous | 0.4336 | ambiguous | -1.367 | Destabilizing | 0.993 | D | 0.413 | neutral | None | None | None | None | N |
I/M | 0.3625 | ambiguous | 0.4547 | ambiguous | -1.342 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
I/N | 0.9883 | likely_pathogenic | 0.9911 | pathogenic | -2.643 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
I/P | 0.9983 | likely_pathogenic | 0.999 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
I/Q | 0.9941 | likely_pathogenic | 0.9957 | pathogenic | -2.61 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
I/R | 0.9865 | likely_pathogenic | 0.9897 | pathogenic | -1.813 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
I/S | 0.9805 | likely_pathogenic | 0.9878 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
I/T | 0.9484 | likely_pathogenic | 0.9741 | pathogenic | -2.95 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
I/V | 0.1496 | likely_benign | 0.2342 | benign | -1.818 | Destabilizing | 0.993 | D | 0.395 | neutral | None | None | None | None | N |
I/W | 0.9905 | likely_pathogenic | 0.9944 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
I/Y | 0.9716 | likely_pathogenic | 0.9831 | pathogenic | -1.97 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.