Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10048 | 30367;30368;30369 | chr2:178704228;178704227;178704226 | chr2:179568955;179568954;179568953 |
N2AB | 9731 | 29416;29417;29418 | chr2:178704228;178704227;178704226 | chr2:179568955;179568954;179568953 |
N2A | 8804 | 26635;26636;26637 | chr2:178704228;178704227;178704226 | chr2:179568955;179568954;179568953 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.27 | None | 0.357 | 0.113 | 0.296329037015 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7178 | likely_pathogenic | 0.7222 | pathogenic | -1.129 | Destabilizing | 0.995 | D | 0.443 | neutral | None | None | None | None | N |
A/D | 0.4051 | ambiguous | 0.3866 | ambiguous | -1.857 | Destabilizing | 0.704 | D | 0.501 | neutral | None | None | None | None | N |
A/E | 0.3065 | likely_benign | 0.2895 | benign | -1.928 | Destabilizing | 0.27 | N | 0.389 | neutral | None | None | None | None | N |
A/F | 0.4637 | ambiguous | 0.4675 | ambiguous | -1.363 | Destabilizing | 0.893 | D | 0.58 | neutral | None | None | None | None | N |
A/G | 0.2218 | likely_benign | 0.2275 | benign | -1.195 | Destabilizing | 0.425 | N | 0.322 | neutral | None | None | None | None | N |
A/H | 0.5404 | ambiguous | 0.5548 | ambiguous | -1.206 | Destabilizing | 0.007 | N | 0.364 | neutral | None | None | None | None | N |
A/I | 0.3588 | ambiguous | 0.378 | ambiguous | -0.633 | Destabilizing | 0.543 | D | 0.498 | neutral | None | None | None | None | N |
A/K | 0.4269 | ambiguous | 0.4475 | ambiguous | -1.208 | Destabilizing | 0.003 | N | 0.166 | neutral | None | None | None | None | N |
A/L | 0.2424 | likely_benign | 0.251 | benign | -0.633 | Destabilizing | 0.329 | N | 0.386 | neutral | None | None | None | None | N |
A/M | 0.3012 | likely_benign | 0.3103 | benign | -0.431 | Destabilizing | 0.176 | N | 0.289 | neutral | None | None | None | None | N |
A/N | 0.3408 | ambiguous | 0.3369 | benign | -1.017 | Destabilizing | 0.704 | D | 0.501 | neutral | None | None | None | None | N |
A/P | 0.5296 | ambiguous | 0.5691 | pathogenic | -0.719 | Destabilizing | 0.784 | D | 0.499 | neutral | None | None | None | None | N |
A/Q | 0.3482 | ambiguous | 0.3599 | ambiguous | -1.315 | Destabilizing | 0.031 | N | 0.24 | neutral | None | None | None | None | N |
A/R | 0.3772 | ambiguous | 0.3794 | ambiguous | -0.712 | Destabilizing | 0.031 | N | 0.201 | neutral | None | None | None | None | N |
A/S | 0.1077 | likely_benign | 0.1018 | benign | -1.27 | Destabilizing | 0.029 | N | 0.153 | neutral | None | None | None | None | N |
A/T | 0.0981 | likely_benign | 0.0964 | benign | -1.269 | Destabilizing | 0.27 | N | 0.357 | neutral | None | None | None | None | N |
A/V | 0.1884 | likely_benign | 0.1929 | benign | -0.719 | Destabilizing | 0.27 | N | 0.368 | neutral | None | None | None | None | N |
A/W | 0.8298 | likely_pathogenic | 0.83 | pathogenic | -1.61 | Destabilizing | 0.995 | D | 0.563 | neutral | None | None | None | None | N |
A/Y | 0.6075 | likely_pathogenic | 0.6114 | pathogenic | -1.238 | Destabilizing | 0.893 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.