Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10055 | 30388;30389;30390 | chr2:178704207;178704206;178704205 | chr2:179568934;179568933;179568932 |
N2AB | 9738 | 29437;29438;29439 | chr2:178704207;178704206;178704205 | chr2:179568934;179568933;179568932 |
N2A | 8811 | 26656;26657;26658 | chr2:178704207;178704206;178704205 | chr2:179568934;179568933;179568932 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1560511850 | None | 0.939 | None | 0.491 | 0.256 | 0.288352970974 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
Q/H | rs1560511850 | None | 0.939 | None | 0.491 | 0.256 | 0.288352970974 | gnomAD-4.0.0 | 1.59092E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77254E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3495 | ambiguous | 0.4413 | ambiguous | -0.645 | Destabilizing | 0.037 | N | 0.269 | neutral | None | None | None | None | N |
Q/C | 0.922 | likely_pathogenic | 0.9562 | pathogenic | -0.026 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
Q/D | 0.8235 | likely_pathogenic | 0.9134 | pathogenic | -0.618 | Destabilizing | 0.59 | D | 0.446 | neutral | None | None | None | None | N |
Q/E | 0.11 | likely_benign | 0.131 | benign | -0.529 | Destabilizing | 0.007 | N | 0.156 | neutral | None | None | None | None | N |
Q/F | 0.9448 | likely_pathogenic | 0.9729 | pathogenic | -0.36 | Destabilizing | 0.984 | D | 0.549 | neutral | None | None | None | None | N |
Q/G | 0.5472 | ambiguous | 0.6966 | pathogenic | -1.0 | Destabilizing | 0.742 | D | 0.507 | neutral | None | None | None | None | N |
Q/H | 0.6083 | likely_pathogenic | 0.79 | pathogenic | -0.862 | Destabilizing | 0.939 | D | 0.491 | neutral | None | None | None | None | N |
Q/I | 0.7774 | likely_pathogenic | 0.8167 | pathogenic | 0.255 | Stabilizing | 0.953 | D | 0.581 | neutral | None | None | None | None | N |
Q/K | 0.2482 | likely_benign | 0.2991 | benign | -0.387 | Destabilizing | 0.309 | N | 0.457 | neutral | None | None | None | None | N |
Q/L | 0.4974 | ambiguous | 0.6259 | pathogenic | 0.255 | Stabilizing | 0.684 | D | 0.514 | neutral | None | None | None | None | N |
Q/M | 0.6014 | likely_pathogenic | 0.6747 | pathogenic | 0.716 | Stabilizing | 0.984 | D | 0.491 | neutral | None | None | None | None | N |
Q/N | 0.6693 | likely_pathogenic | 0.7893 | pathogenic | -0.939 | Destabilizing | 0.742 | D | 0.491 | neutral | None | None | None | None | N |
Q/P | 0.9254 | likely_pathogenic | 0.9681 | pathogenic | -0.013 | Destabilizing | 0.007 | N | 0.303 | neutral | None | None | None | None | N |
Q/R | 0.2538 | likely_benign | 0.3308 | benign | -0.306 | Destabilizing | 0.684 | D | 0.491 | neutral | None | None | None | None | N |
Q/S | 0.4912 | ambiguous | 0.6262 | pathogenic | -1.013 | Destabilizing | 0.373 | N | 0.438 | neutral | None | None | None | None | N |
Q/T | 0.4744 | ambiguous | 0.5733 | pathogenic | -0.729 | Destabilizing | 0.742 | D | 0.498 | neutral | None | None | None | None | N |
Q/V | 0.6337 | likely_pathogenic | 0.7208 | pathogenic | -0.013 | Destabilizing | 0.742 | D | 0.537 | neutral | None | None | None | None | N |
Q/W | 0.924 | likely_pathogenic | 0.9608 | pathogenic | -0.238 | Destabilizing | 0.996 | D | 0.585 | neutral | None | None | None | None | N |
Q/Y | 0.8899 | likely_pathogenic | 0.9486 | pathogenic | -0.02 | Destabilizing | 0.984 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.