Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10070 | 30433;30434;30435 | chr2:178704162;178704161;178704160 | chr2:179568889;179568888;179568887 |
N2AB | 9753 | 29482;29483;29484 | chr2:178704162;178704161;178704160 | chr2:179568889;179568888;179568887 |
N2A | 8826 | 26701;26702;26703 | chr2:178704162;178704161;178704160 | chr2:179568889;179568888;179568887 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.001 | None | 0.167 | 0.112 | 0.0401082797425 | gnomAD-4.0.0 | 6.84234E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99433E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.185 | likely_benign | 0.2144 | benign | -0.707 | Destabilizing | 0.549 | D | 0.523 | neutral | None | None | None | None | N |
E/C | 0.9072 | likely_pathogenic | 0.929 | pathogenic | -0.425 | Destabilizing | 0.992 | D | 0.621 | neutral | None | None | None | None | N |
E/D | 0.1137 | likely_benign | 0.1459 | benign | -1.253 | Destabilizing | 0.001 | N | 0.167 | neutral | None | None | None | None | N |
E/F | 0.6763 | likely_pathogenic | 0.729 | pathogenic | -0.576 | Destabilizing | 0.972 | D | 0.625 | neutral | None | None | None | None | N |
E/G | 0.2638 | likely_benign | 0.3778 | ambiguous | -1.038 | Destabilizing | 0.549 | D | 0.552 | neutral | None | None | None | None | N |
E/H | 0.4763 | ambiguous | 0.5538 | ambiguous | -0.956 | Destabilizing | 0.92 | D | 0.58 | neutral | None | None | None | None | N |
E/I | 0.3558 | ambiguous | 0.4015 | ambiguous | 0.18 | Stabilizing | 0.92 | D | 0.64 | neutral | None | None | None | None | N |
E/K | 0.1947 | likely_benign | 0.2448 | benign | -0.687 | Destabilizing | 0.549 | D | 0.526 | neutral | None | None | None | None | N |
E/L | 0.3914 | ambiguous | 0.4611 | ambiguous | 0.18 | Stabilizing | 0.92 | D | 0.61 | neutral | None | None | None | None | N |
E/M | 0.4611 | ambiguous | 0.5027 | ambiguous | 0.625 | Stabilizing | 0.992 | D | 0.62 | neutral | None | None | None | None | N |
E/N | 0.2012 | likely_benign | 0.2537 | benign | -0.975 | Destabilizing | 0.021 | N | 0.277 | neutral | None | None | None | None | N |
E/P | 0.854 | likely_pathogenic | 0.9308 | pathogenic | -0.093 | Destabilizing | 0.92 | D | 0.605 | neutral | None | None | None | None | N |
E/Q | 0.1736 | likely_benign | 0.2017 | benign | -0.879 | Destabilizing | 0.549 | D | 0.556 | neutral | None | None | None | None | N |
E/R | 0.3151 | likely_benign | 0.3905 | ambiguous | -0.55 | Destabilizing | 0.92 | D | 0.585 | neutral | None | None | None | None | N |
E/S | 0.2034 | likely_benign | 0.2521 | benign | -1.286 | Destabilizing | 0.447 | N | 0.535 | neutral | None | None | None | None | N |
E/T | 0.2264 | likely_benign | 0.2592 | benign | -1.02 | Destabilizing | 0.617 | D | 0.537 | neutral | None | None | None | None | N |
E/V | 0.2121 | likely_benign | 0.2427 | benign | -0.093 | Destabilizing | 0.896 | D | 0.615 | neutral | None | None | None | None | N |
E/W | 0.8904 | likely_pathogenic | 0.9189 | pathogenic | -0.505 | Destabilizing | 0.992 | D | 0.625 | neutral | None | None | None | None | N |
E/Y | 0.5969 | likely_pathogenic | 0.6648 | pathogenic | -0.37 | Destabilizing | 0.972 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.