Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10090 | 30493;30494;30495 | chr2:178702619;178702618;178702617 | chr2:179567346;179567345;179567344 |
N2AB | 9773 | 29542;29543;29544 | chr2:178702619;178702618;178702617 | chr2:179567346;179567345;179567344 |
N2A | 8846 | 26761;26762;26763 | chr2:178702619;178702618;178702617 | chr2:179567346;179567345;179567344 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs2075204317 | None | 0.061 | None | 0.143 | 0.146 | 0.218845423259 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs2075204317 | None | 0.061 | None | 0.143 | 0.146 | 0.218845423259 | gnomAD-4.0.0 | 7.68494E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19625E-05 | 0 | 2.84349E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2091 | likely_benign | 0.229 | benign | -0.495 | Destabilizing | 0.863 | D | 0.307 | neutral | None | None | None | None | N |
S/C | 0.5279 | ambiguous | 0.5645 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.402 | neutral | None | None | None | None | N |
S/D | 0.8272 | likely_pathogenic | 0.821 | pathogenic | 0.217 | Stabilizing | 0.884 | D | 0.231 | neutral | None | None | None | None | N |
S/E | 0.8629 | likely_pathogenic | 0.8569 | pathogenic | 0.179 | Stabilizing | 0.939 | D | 0.233 | neutral | None | None | None | None | N |
S/F | 0.8467 | likely_pathogenic | 0.8786 | pathogenic | -0.751 | Destabilizing | 0.997 | D | 0.497 | neutral | None | None | None | None | N |
S/G | 0.2897 | likely_benign | 0.3108 | benign | -0.702 | Destabilizing | 0.826 | D | 0.281 | neutral | None | None | None | None | N |
S/H | 0.7979 | likely_pathogenic | 0.7994 | pathogenic | -1.161 | Destabilizing | 0.991 | D | 0.372 | neutral | None | None | None | None | N |
S/I | 0.8054 | likely_pathogenic | 0.841 | pathogenic | -0.066 | Destabilizing | 0.996 | D | 0.505 | neutral | None | None | None | None | N |
S/K | 0.952 | likely_pathogenic | 0.9502 | pathogenic | -0.56 | Destabilizing | 0.759 | D | 0.253 | neutral | None | None | None | None | N |
S/L | 0.4326 | ambiguous | 0.4955 | ambiguous | -0.066 | Destabilizing | 0.939 | D | 0.405 | neutral | None | None | None | None | N |
S/M | 0.6539 | likely_pathogenic | 0.6715 | pathogenic | 0.077 | Stabilizing | 0.997 | D | 0.365 | neutral | None | None | None | None | N |
S/N | 0.4789 | ambiguous | 0.443 | ambiguous | -0.388 | Destabilizing | 0.061 | N | 0.143 | neutral | None | None | None | None | N |
S/P | 0.616 | likely_pathogenic | 0.6713 | pathogenic | -0.175 | Destabilizing | 0.997 | D | 0.379 | neutral | None | None | None | None | N |
S/Q | 0.8354 | likely_pathogenic | 0.8315 | pathogenic | -0.564 | Destabilizing | 0.939 | D | 0.318 | neutral | None | None | None | None | N |
S/R | 0.9174 | likely_pathogenic | 0.9263 | pathogenic | -0.438 | Destabilizing | 0.015 | N | 0.21 | neutral | None | None | None | None | N |
S/T | 0.2773 | likely_benign | 0.2783 | benign | -0.476 | Destabilizing | 0.826 | D | 0.259 | neutral | None | None | None | None | N |
S/V | 0.7684 | likely_pathogenic | 0.7974 | pathogenic | -0.175 | Destabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | N |
S/W | 0.8542 | likely_pathogenic | 0.8836 | pathogenic | -0.721 | Destabilizing | 0.999 | D | 0.572 | neutral | None | None | None | None | N |
S/Y | 0.7467 | likely_pathogenic | 0.7737 | pathogenic | -0.457 | Destabilizing | 0.997 | D | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.