Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10107 | 30544;30545;30546 | chr2:178702568;178702567;178702566 | chr2:179567295;179567294;179567293 |
N2AB | 9790 | 29593;29594;29595 | chr2:178702568;178702567;178702566 | chr2:179567295;179567294;179567293 |
N2A | 8863 | 26812;26813;26814 | chr2:178702568;178702567;178702566 | chr2:179567295;179567294;179567293 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.801 | None | 0.572 | 0.259 | 0.683524595578 | gnomAD-4.0.0 | 1.59085E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85745E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8228 | likely_pathogenic | 0.7722 | pathogenic | -0.788 | Destabilizing | 0.525 | D | 0.506 | neutral | None | None | None | None | N |
I/C | 0.9822 | likely_pathogenic | 0.9749 | pathogenic | -0.544 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
I/D | 0.971 | likely_pathogenic | 0.9701 | pathogenic | -0.412 | Destabilizing | 0.016 | N | 0.35 | neutral | None | None | None | None | N |
I/E | 0.9107 | likely_pathogenic | 0.8972 | pathogenic | -0.493 | Destabilizing | 0.728 | D | 0.586 | neutral | None | None | None | None | N |
I/F | 0.6787 | likely_pathogenic | 0.6164 | pathogenic | -0.715 | Destabilizing | 0.934 | D | 0.553 | neutral | None | None | None | None | N |
I/G | 0.9829 | likely_pathogenic | 0.979 | pathogenic | -0.979 | Destabilizing | 0.915 | D | 0.599 | neutral | None | None | None | None | N |
I/H | 0.9499 | likely_pathogenic | 0.935 | pathogenic | -0.23 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | N |
I/K | 0.8653 | likely_pathogenic | 0.8381 | pathogenic | -0.481 | Destabilizing | 0.974 | D | 0.604 | neutral | None | None | None | None | N |
I/L | 0.4205 | ambiguous | 0.3769 | ambiguous | -0.394 | Destabilizing | 0.267 | N | 0.297 | neutral | None | None | None | None | N |
I/M | 0.3526 | ambiguous | 0.3233 | benign | -0.411 | Destabilizing | 0.966 | D | 0.547 | neutral | None | None | None | None | N |
I/N | 0.8589 | likely_pathogenic | 0.8562 | pathogenic | -0.227 | Destabilizing | 0.934 | D | 0.602 | neutral | None | None | None | None | N |
I/P | 0.9835 | likely_pathogenic | 0.989 | pathogenic | -0.492 | Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | N |
I/Q | 0.9102 | likely_pathogenic | 0.888 | pathogenic | -0.464 | Destabilizing | 0.974 | D | 0.611 | neutral | None | None | None | None | N |
I/R | 0.8295 | likely_pathogenic | 0.7851 | pathogenic | 0.114 | Stabilizing | 0.974 | D | 0.613 | neutral | None | None | None | None | N |
I/S | 0.8466 | likely_pathogenic | 0.8241 | pathogenic | -0.669 | Destabilizing | 0.801 | D | 0.587 | neutral | None | None | None | None | N |
I/T | 0.6183 | likely_pathogenic | 0.5314 | ambiguous | -0.643 | Destabilizing | 0.801 | D | 0.572 | neutral | None | None | None | None | N |
I/V | 0.1593 | likely_benign | 0.1035 | benign | -0.492 | Destabilizing | 0.005 | N | 0.16 | neutral | None | None | None | None | N |
I/W | 0.9752 | likely_pathogenic | 0.9767 | pathogenic | -0.736 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
I/Y | 0.932 | likely_pathogenic | 0.9285 | pathogenic | -0.498 | Destabilizing | 0.974 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.