Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10119 | 30580;30581;30582 | chr2:178702532;178702531;178702530 | chr2:179567259;179567258;179567257 |
N2AB | 9802 | 29629;29630;29631 | chr2:178702532;178702531;178702530 | chr2:179567259;179567258;179567257 |
N2A | 8875 | 26848;26849;26850 | chr2:178702532;178702531;178702530 | chr2:179567259;179567258;179567257 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs778565859 | 0.129 | 1.0 | None | 0.527 | 0.256 | 0.475034548194 | gnomAD-2.1.1 | 9.23E-05 | None | None | None | None | N | None | 0 | 6.66126E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs778565859 | 0.129 | 1.0 | None | 0.527 | 0.256 | 0.475034548194 | gnomAD-4.0.0 | 1.64192E-05 | None | None | None | None | N | None | 0 | 4.91906E-04 | None | 0 | 0 | None | 0 | 0 | 1.79878E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4962 | ambiguous | 0.4495 | ambiguous | -0.68 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
E/C | 0.9937 | likely_pathogenic | 0.9914 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
E/D | 0.7433 | likely_pathogenic | 0.7437 | pathogenic | -0.422 | Destabilizing | 0.999 | D | 0.443 | neutral | None | None | None | None | N |
E/F | 0.9937 | likely_pathogenic | 0.9915 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
E/G | 0.682 | likely_pathogenic | 0.6353 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.58 | neutral | None | None | None | None | N |
E/H | 0.9679 | likely_pathogenic | 0.9626 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
E/I | 0.9508 | likely_pathogenic | 0.9334 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/K | 0.7307 | likely_pathogenic | 0.6746 | pathogenic | 0.236 | Stabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
E/L | 0.9536 | likely_pathogenic | 0.9378 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
E/M | 0.9564 | likely_pathogenic | 0.9403 | pathogenic | 0.118 | Stabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
E/N | 0.8979 | likely_pathogenic | 0.8772 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/P | 0.7904 | likely_pathogenic | 0.7435 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
E/Q | 0.5654 | likely_pathogenic | 0.5285 | ambiguous | -0.22 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
E/R | 0.8384 | likely_pathogenic | 0.8013 | pathogenic | 0.46 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
E/S | 0.7399 | likely_pathogenic | 0.7132 | pathogenic | -0.437 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
E/T | 0.8404 | likely_pathogenic | 0.8051 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
E/V | 0.8395 | likely_pathogenic | 0.8049 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
E/W | 0.9981 | likely_pathogenic | 0.9977 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Y | 0.9866 | likely_pathogenic | 0.9831 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.