Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10137 | 30634;30635;30636 | chr2:178702478;178702477;178702476 | chr2:179567205;179567204;179567203 |
N2AB | 9820 | 29683;29684;29685 | chr2:178702478;178702477;178702476 | chr2:179567205;179567204;179567203 |
N2A | 8893 | 26902;26903;26904 | chr2:178702478;178702477;178702476 | chr2:179567205;179567204;179567203 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs2075178264 | None | 0.811 | None | 0.35 | 0.215 | 0.344945010812 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/N | rs2075178264 | None | 0.811 | None | 0.35 | 0.215 | 0.344945010812 | gnomAD-4.0.0 | 2.56188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78496E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8865 | likely_pathogenic | 0.9339 | pathogenic | -0.54 | Destabilizing | 0.737 | D | 0.411 | neutral | None | None | None | None | N |
H/C | 0.7213 | likely_pathogenic | 0.8095 | pathogenic | 0.041 | Stabilizing | 0.998 | D | 0.478 | neutral | None | None | None | None | N |
H/D | 0.831 | likely_pathogenic | 0.9084 | pathogenic | -0.205 | Destabilizing | 0.837 | D | 0.42 | neutral | None | None | None | None | N |
H/E | 0.8621 | likely_pathogenic | 0.9165 | pathogenic | -0.168 | Destabilizing | 0.584 | D | 0.265 | neutral | None | None | None | None | N |
H/F | 0.7963 | likely_pathogenic | 0.8467 | pathogenic | -0.129 | Destabilizing | 0.993 | D | 0.442 | neutral | None | None | None | None | N |
H/G | 0.9084 | likely_pathogenic | 0.9474 | pathogenic | -0.83 | Destabilizing | 0.85 | D | 0.472 | neutral | None | None | None | None | N |
H/I | 0.9338 | likely_pathogenic | 0.9689 | pathogenic | 0.217 | Stabilizing | 0.993 | D | 0.535 | neutral | None | None | None | None | N |
H/K | 0.777 | likely_pathogenic | 0.8151 | pathogenic | -0.454 | Destabilizing | 0.037 | N | 0.116 | neutral | None | None | None | None | N |
H/L | 0.5934 | likely_pathogenic | 0.7337 | pathogenic | 0.217 | Stabilizing | 0.837 | D | 0.511 | neutral | None | None | None | None | N |
H/M | 0.9294 | likely_pathogenic | 0.9603 | pathogenic | 0.198 | Stabilizing | 0.993 | D | 0.476 | neutral | None | None | None | None | N |
H/N | 0.4378 | ambiguous | 0.5811 | pathogenic | -0.249 | Destabilizing | 0.811 | D | 0.35 | neutral | None | None | None | None | N |
H/P | 0.8751 | likely_pathogenic | 0.9438 | pathogenic | -0.012 | Destabilizing | 0.969 | D | 0.507 | neutral | None | None | None | None | N |
H/Q | 0.6617 | likely_pathogenic | 0.7616 | pathogenic | -0.176 | Destabilizing | 0.166 | N | 0.115 | neutral | None | None | None | None | N |
H/R | 0.436 | ambiguous | 0.4862 | ambiguous | -0.653 | Destabilizing | 0.007 | N | 0.082 | neutral | None | None | None | None | N |
H/S | 0.7522 | likely_pathogenic | 0.8275 | pathogenic | -0.393 | Destabilizing | 0.737 | D | 0.409 | neutral | None | None | None | None | N |
H/T | 0.874 | likely_pathogenic | 0.9227 | pathogenic | -0.266 | Destabilizing | 0.932 | D | 0.49 | neutral | None | None | None | None | N |
H/V | 0.9089 | likely_pathogenic | 0.9528 | pathogenic | -0.012 | Destabilizing | 0.932 | D | 0.535 | neutral | None | None | None | None | N |
H/W | 0.7789 | likely_pathogenic | 0.8168 | pathogenic | -0.039 | Destabilizing | 0.998 | D | 0.454 | neutral | None | None | None | None | N |
H/Y | 0.3741 | ambiguous | 0.4946 | ambiguous | 0.337 | Stabilizing | 0.969 | D | 0.356 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.