Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10164 | 30715;30716;30717 | chr2:178702189;178702188;178702187 | chr2:179566916;179566915;179566914 |
N2AB | 9847 | 29764;29765;29766 | chr2:178702189;178702188;178702187 | chr2:179566916;179566915;179566914 |
N2A | 8920 | 26983;26984;26985 | chr2:178702189;178702188;178702187 | chr2:179566916;179566915;179566914 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1064797276 | -0.862 | 0.999 | None | 0.486 | 0.131 | 0.267755039894 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1064797276 | -0.862 | 0.999 | None | 0.486 | 0.131 | 0.267755039894 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1064797276 | -0.862 | 0.999 | None | 0.486 | 0.131 | 0.267755039894 | gnomAD-4.0.0 | 6.84134E-07 | None | None | None | None | N | None | 0 | 2.23594E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8255 | likely_pathogenic | 0.8493 | pathogenic | -0.912 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/C | 0.995 | likely_pathogenic | 0.9959 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/D | 0.8835 | likely_pathogenic | 0.9194 | pathogenic | -0.915 | Destabilizing | 0.999 | D | 0.486 | neutral | None | None | None | None | N |
E/F | 0.9923 | likely_pathogenic | 0.9935 | pathogenic | -0.053 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
E/G | 0.9372 | likely_pathogenic | 0.9481 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
E/H | 0.9709 | likely_pathogenic | 0.9754 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/I | 0.9522 | likely_pathogenic | 0.9619 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/K | 0.8552 | likely_pathogenic | 0.879 | pathogenic | -0.29 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
E/L | 0.9685 | likely_pathogenic | 0.9742 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/M | 0.9592 | likely_pathogenic | 0.9656 | pathogenic | 0.672 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/N | 0.9505 | likely_pathogenic | 0.9613 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/P | 0.9971 | likely_pathogenic | 0.9968 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/Q | 0.6662 | likely_pathogenic | 0.7084 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/R | 0.8997 | likely_pathogenic | 0.9114 | pathogenic | 0.027 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/S | 0.8801 | likely_pathogenic | 0.8965 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
E/T | 0.8827 | likely_pathogenic | 0.8996 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
E/V | 0.8634 | likely_pathogenic | 0.8828 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
E/W | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | 0.34 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/Y | 0.9873 | likely_pathogenic | 0.9897 | pathogenic | 0.276 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.