Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1086 | 3481;3482;3483 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
N2AB | 1086 | 3481;3482;3483 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
N2A | 1086 | 3481;3482;3483 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
N2B | 1040 | 3343;3344;3345 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
Novex-1 | 1040 | 3343;3344;3345 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
Novex-2 | 1040 | 3343;3344;3345 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
Novex-3 | 1086 | 3481;3482;3483 | chr2:178782336;178782335;178782334 | chr2:179647063;179647062;179647061 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1167240676 | -0.786 | 0.005 | N | 0.189 | 0.063 | 0.185906805712 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
T/A | rs1167240676 | -0.786 | 0.005 | N | 0.189 | 0.063 | 0.185906805712 | gnomAD-4.0.0 | 1.59056E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85657E-06 | 0 | 0 |
T/R | None | None | None | N | 0.103 | 0.096 | 0.439339381091 | gnomAD-4.0.0 | 1.59054E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88196E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0972 | likely_benign | 0.1004 | benign | -0.672 | Destabilizing | 0.005 | N | 0.189 | neutral | N | 0.503232621 | None | None | I |
T/C | 0.5233 | ambiguous | 0.5106 | ambiguous | -0.419 | Destabilizing | 0.356 | N | 0.317 | neutral | None | None | None | None | I |
T/D | 0.4461 | ambiguous | 0.4576 | ambiguous | 0.057 | Stabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | I |
T/E | 0.271 | likely_benign | 0.2903 | benign | 0.058 | Stabilizing | 0.007 | N | 0.298 | neutral | None | None | None | None | I |
T/F | 0.3237 | likely_benign | 0.3278 | benign | -0.748 | Destabilizing | 0.214 | N | 0.463 | neutral | None | None | None | None | I |
T/G | 0.2693 | likely_benign | 0.2546 | benign | -0.926 | Destabilizing | 0.016 | N | 0.28 | neutral | None | None | None | None | I |
T/H | 0.2673 | likely_benign | 0.2778 | benign | -1.126 | Destabilizing | 0.356 | N | 0.41 | neutral | None | None | None | None | I |
T/I | 0.2352 | likely_benign | 0.2578 | benign | -0.092 | Destabilizing | 0.029 | N | 0.349 | neutral | N | 0.489513398 | None | None | I |
T/K | 0.1806 | likely_benign | 0.2061 | benign | -0.635 | Destabilizing | None | N | 0.091 | neutral | N | 0.464376799 | None | None | I |
T/L | 0.1353 | likely_benign | 0.1348 | benign | -0.092 | Destabilizing | 0.002 | N | 0.305 | neutral | None | None | None | None | I |
T/M | 0.1185 | likely_benign | 0.1233 | benign | 0.021 | Stabilizing | 0.001 | N | 0.199 | neutral | None | None | None | None | I |
T/N | 0.1617 | likely_benign | 0.1692 | benign | -0.565 | Destabilizing | 0.016 | N | 0.188 | neutral | None | None | None | None | I |
T/P | 0.4612 | ambiguous | 0.4865 | ambiguous | -0.253 | Destabilizing | 0.055 | N | 0.357 | neutral | N | 0.516655465 | None | None | I |
T/Q | 0.1756 | likely_benign | 0.192 | benign | -0.667 | Destabilizing | 0.001 | N | 0.113 | neutral | None | None | None | None | I |
T/R | 0.1298 | likely_benign | 0.1506 | benign | -0.419 | Destabilizing | None | N | 0.103 | neutral | N | 0.475691818 | None | None | I |
T/S | 0.1003 | likely_benign | 0.1005 | benign | -0.846 | Destabilizing | None | N | 0.099 | neutral | N | 0.49114849 | None | None | I |
T/V | 0.1691 | likely_benign | 0.1786 | benign | -0.253 | Destabilizing | 0.016 | N | 0.206 | neutral | None | None | None | None | I |
T/W | 0.6345 | likely_pathogenic | 0.6416 | pathogenic | -0.726 | Destabilizing | 0.864 | D | 0.375 | neutral | None | None | None | None | I |
T/Y | 0.3622 | ambiguous | 0.3754 | ambiguous | -0.481 | Destabilizing | 0.356 | N | 0.479 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.