Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1094 | 3505;3506;3507 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
N2AB | 1094 | 3505;3506;3507 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
N2A | 1094 | 3505;3506;3507 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
N2B | 1048 | 3367;3368;3369 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
Novex-1 | 1048 | 3367;3368;3369 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
Novex-2 | 1048 | 3367;3368;3369 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
Novex-3 | 1094 | 3505;3506;3507 | chr2:178782312;178782311;178782310 | chr2:179647039;179647038;179647037 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.034 | N | 0.477 | 0.088 | 0.214338557667 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1699 | likely_benign | 0.1672 | benign | -0.512 | Destabilizing | 0.201 | N | 0.567 | neutral | N | 0.442493228 | None | None | I |
V/C | 0.8472 | likely_pathogenic | 0.8416 | pathogenic | -0.726 | Destabilizing | 0.982 | D | 0.567 | neutral | None | None | None | None | I |
V/D | 0.4084 | ambiguous | 0.373 | ambiguous | -0.165 | Destabilizing | 0.826 | D | 0.66 | neutral | None | None | None | None | I |
V/E | 0.2346 | likely_benign | 0.2143 | benign | -0.269 | Destabilizing | 0.781 | D | 0.631 | neutral | N | 0.465444582 | None | None | I |
V/F | 0.2081 | likely_benign | 0.1987 | benign | -0.667 | Destabilizing | 0.7 | D | 0.545 | neutral | None | None | None | None | I |
V/G | 0.2675 | likely_benign | 0.2504 | benign | -0.655 | Destabilizing | 0.638 | D | 0.653 | neutral | N | 0.500082925 | None | None | I |
V/H | 0.5843 | likely_pathogenic | 0.5746 | pathogenic | -0.212 | Destabilizing | 0.982 | D | 0.674 | neutral | None | None | None | None | I |
V/I | 0.0872 | likely_benign | 0.0838 | benign | -0.28 | Destabilizing | 0.002 | N | 0.318 | neutral | None | None | None | None | I |
V/K | 0.3059 | likely_benign | 0.2991 | benign | -0.46 | Destabilizing | 0.7 | D | 0.627 | neutral | None | None | None | None | I |
V/L | 0.1659 | likely_benign | 0.1634 | benign | -0.28 | Destabilizing | 0.034 | N | 0.477 | neutral | N | 0.4559612 | None | None | I |
V/M | 0.1295 | likely_benign | 0.1214 | benign | -0.385 | Destabilizing | 0.034 | N | 0.495 | neutral | N | 0.483303749 | None | None | I |
V/N | 0.3212 | likely_benign | 0.2969 | benign | -0.235 | Destabilizing | 0.826 | D | 0.659 | neutral | None | None | None | None | I |
V/P | 0.7291 | likely_pathogenic | 0.7238 | pathogenic | -0.322 | Destabilizing | 0.935 | D | 0.623 | neutral | None | None | None | None | I |
V/Q | 0.2693 | likely_benign | 0.2586 | benign | -0.455 | Destabilizing | 0.7 | D | 0.626 | neutral | None | None | None | None | I |
V/R | 0.2738 | likely_benign | 0.2749 | benign | 0.029 | Stabilizing | 0.7 | D | 0.663 | neutral | None | None | None | None | I |
V/S | 0.2105 | likely_benign | 0.204 | benign | -0.634 | Destabilizing | 0.7 | D | 0.596 | neutral | None | None | None | None | I |
V/T | 0.1564 | likely_benign | 0.1553 | benign | -0.631 | Destabilizing | 0.399 | N | 0.547 | neutral | None | None | None | None | I |
V/W | 0.8189 | likely_pathogenic | 0.8061 | pathogenic | -0.741 | Destabilizing | 0.982 | D | 0.699 | prob.neutral | None | None | None | None | I |
V/Y | 0.626 | likely_pathogenic | 0.6142 | pathogenic | -0.445 | Destabilizing | 0.826 | D | 0.539 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.