Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1113 | 3562;3563;3564 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
N2AB | 1113 | 3562;3563;3564 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
N2A | 1113 | 3562;3563;3564 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
N2B | 1067 | 3424;3425;3426 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
Novex-1 | 1067 | 3424;3425;3426 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
Novex-2 | 1067 | 3424;3425;3426 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
Novex-3 | 1113 | 3562;3563;3564 | chr2:178782255;178782254;178782253 | chr2:179646982;179646981;179646980 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs763409137 | -2.252 | 0.822 | D | 0.646 | 0.681 | 0.732157991247 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.76E-05 | 0 |
V/A | rs763409137 | -2.252 | 0.822 | D | 0.646 | 0.681 | 0.732157991247 | gnomAD-4.0.0 | 1.02611E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34895E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8061 | likely_pathogenic | 0.7692 | pathogenic | -2.158 | Highly Destabilizing | 0.822 | D | 0.646 | neutral | D | 0.623861126 | None | None | N |
V/C | 0.9371 | likely_pathogenic | 0.9231 | pathogenic | -1.304 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/D | 0.9975 | likely_pathogenic | 0.9965 | pathogenic | -3.097 | Highly Destabilizing | 0.993 | D | 0.831 | deleterious | None | None | None | None | N |
V/E | 0.9916 | likely_pathogenic | 0.9893 | pathogenic | -2.871 | Highly Destabilizing | 0.99 | D | 0.827 | deleterious | D | 0.749827329 | None | None | N |
V/F | 0.7124 | likely_pathogenic | 0.6593 | pathogenic | -1.506 | Destabilizing | 0.956 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/G | 0.9331 | likely_pathogenic | 0.9129 | pathogenic | -2.617 | Highly Destabilizing | 0.971 | D | 0.831 | deleterious | D | 0.749827329 | None | None | N |
V/H | 0.9946 | likely_pathogenic | 0.9933 | pathogenic | -2.392 | Highly Destabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | N |
V/I | 0.0908 | likely_benign | 0.0901 | benign | -0.844 | Destabilizing | 0.006 | N | 0.184 | neutral | N | 0.467767293 | None | None | N |
V/K | 0.9924 | likely_pathogenic | 0.9909 | pathogenic | -1.829 | Destabilizing | 0.978 | D | 0.828 | deleterious | None | None | None | None | N |
V/L | 0.5805 | likely_pathogenic | 0.5089 | ambiguous | -0.844 | Destabilizing | 0.247 | N | 0.551 | neutral | D | 0.548439314 | None | None | N |
V/M | 0.5883 | likely_pathogenic | 0.5496 | ambiguous | -0.66 | Destabilizing | 0.956 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/N | 0.9893 | likely_pathogenic | 0.9871 | pathogenic | -2.203 | Highly Destabilizing | 0.993 | D | 0.832 | deleterious | None | None | None | None | N |
V/P | 0.9872 | likely_pathogenic | 0.9835 | pathogenic | -1.264 | Destabilizing | 0.993 | D | 0.82 | deleterious | None | None | None | None | N |
V/Q | 0.9857 | likely_pathogenic | 0.9834 | pathogenic | -2.083 | Highly Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | N |
V/R | 0.9832 | likely_pathogenic | 0.9794 | pathogenic | -1.632 | Destabilizing | 0.993 | D | 0.831 | deleterious | None | None | None | None | N |
V/S | 0.9398 | likely_pathogenic | 0.931 | pathogenic | -2.664 | Highly Destabilizing | 0.978 | D | 0.818 | deleterious | None | None | None | None | N |
V/T | 0.8257 | likely_pathogenic | 0.8315 | pathogenic | -2.324 | Highly Destabilizing | 0.86 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/W | 0.9939 | likely_pathogenic | 0.9915 | pathogenic | -2.063 | Highly Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
V/Y | 0.9746 | likely_pathogenic | 0.9671 | pathogenic | -1.662 | Destabilizing | 0.978 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.