Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1124 | 3595;3596;3597 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
N2AB | 1124 | 3595;3596;3597 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
N2A | 1124 | 3595;3596;3597 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
N2B | 1078 | 3457;3458;3459 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
Novex-1 | 1078 | 3457;3458;3459 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
Novex-2 | 1078 | 3457;3458;3459 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
Novex-3 | 1124 | 3595;3596;3597 | chr2:178782222;178782221;178782220 | chr2:179646949;179646948;179646947 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2092846515 | None | 0.223 | N | 0.473 | 0.139 | 0.149567049428 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
T/S | None | None | 0.004 | N | 0.329 | 0.135 | 0.12205267543 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1071 | likely_benign | 0.0884 | benign | -0.194 | Destabilizing | 0.223 | N | 0.473 | neutral | N | 0.442353121 | None | None | N |
T/C | 0.7622 | likely_pathogenic | 0.6602 | pathogenic | -0.252 | Destabilizing | 0.98 | D | 0.641 | neutral | None | None | None | None | N |
T/D | 0.7062 | likely_pathogenic | 0.59 | pathogenic | 0.323 | Stabilizing | 0.764 | D | 0.624 | neutral | None | None | None | None | N |
T/E | 0.7097 | likely_pathogenic | 0.5907 | pathogenic | 0.237 | Stabilizing | 0.764 | D | 0.617 | neutral | None | None | None | None | N |
T/F | 0.7213 | likely_pathogenic | 0.6173 | pathogenic | -0.808 | Destabilizing | 0.929 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/G | 0.2672 | likely_benign | 0.2209 | benign | -0.28 | Destabilizing | 0.48 | N | 0.568 | neutral | None | None | None | None | N |
T/H | 0.6126 | likely_pathogenic | 0.4944 | ambiguous | -0.57 | Destabilizing | 0.98 | D | 0.647 | neutral | None | None | None | None | N |
T/I | 0.6857 | likely_pathogenic | 0.5628 | ambiguous | -0.094 | Destabilizing | 0.83 | D | 0.665 | neutral | N | 0.478245249 | None | None | N |
T/K | 0.6346 | likely_pathogenic | 0.523 | ambiguous | -0.189 | Destabilizing | 0.764 | D | 0.626 | neutral | None | None | None | None | N |
T/L | 0.3501 | ambiguous | 0.276 | benign | -0.094 | Destabilizing | 0.648 | D | 0.585 | neutral | None | None | None | None | N |
T/M | 0.2542 | likely_benign | 0.2034 | benign | -0.035 | Destabilizing | 0.993 | D | 0.665 | neutral | None | None | None | None | N |
T/N | 0.2324 | likely_benign | 0.1816 | benign | -0.002 | Destabilizing | 0.709 | D | 0.609 | neutral | N | 0.421744186 | None | None | N |
T/P | 0.2075 | likely_benign | 0.1596 | benign | -0.101 | Destabilizing | 0.83 | D | 0.658 | neutral | N | 0.427455694 | None | None | N |
T/Q | 0.5533 | ambiguous | 0.4567 | ambiguous | -0.198 | Destabilizing | 0.866 | D | 0.663 | neutral | None | None | None | None | N |
T/R | 0.5778 | likely_pathogenic | 0.4655 | ambiguous | 0.011 | Stabilizing | 0.866 | D | 0.653 | neutral | None | None | None | None | N |
T/S | 0.0962 | likely_benign | 0.0845 | benign | -0.194 | Destabilizing | 0.004 | N | 0.329 | neutral | N | 0.424626715 | None | None | N |
T/V | 0.434 | ambiguous | 0.36 | ambiguous | -0.101 | Destabilizing | 0.648 | D | 0.54 | neutral | None | None | None | None | N |
T/W | 0.9003 | likely_pathogenic | 0.8495 | pathogenic | -0.866 | Destabilizing | 0.993 | D | 0.669 | neutral | None | None | None | None | N |
T/Y | 0.6907 | likely_pathogenic | 0.595 | pathogenic | -0.543 | Destabilizing | 0.929 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.