Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1128 | 3607;3608;3609 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
N2AB | 1128 | 3607;3608;3609 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
N2A | 1128 | 3607;3608;3609 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
N2B | 1082 | 3469;3470;3471 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
Novex-1 | 1082 | 3469;3470;3471 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
Novex-2 | 1082 | 3469;3470;3471 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
Novex-3 | 1128 | 3607;3608;3609 | chr2:178781262;178781261;178781260 | chr2:179645989;179645988;179645987 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.816 | 0.756 | 0.772762111909 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85732E-06 | 0 | 0 |
Y/H | None | None | 1.0 | N | 0.715 | 0.682 | 0.519024713989 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9674 | likely_pathogenic | 0.9541 | pathogenic | -2.769 | Highly Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
Y/C | 0.568 | likely_pathogenic | 0.4897 | ambiguous | -2.068 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | D | 0.589492175 | None | None | N |
Y/D | 0.9715 | likely_pathogenic | 0.9665 | pathogenic | -1.982 | Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.514231533 | None | None | N |
Y/E | 0.9821 | likely_pathogenic | 0.9756 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Y/F | 0.2836 | likely_benign | 0.2523 | benign | -1.104 | Destabilizing | 0.999 | D | 0.511 | neutral | N | 0.465006975 | None | None | N |
Y/G | 0.95 | likely_pathogenic | 0.9337 | pathogenic | -3.185 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/H | 0.4895 | ambiguous | 0.4972 | ambiguous | -1.744 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.50283256 | None | None | N |
Y/I | 0.9281 | likely_pathogenic | 0.8857 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
Y/K | 0.9809 | likely_pathogenic | 0.9668 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
Y/L | 0.862 | likely_pathogenic | 0.8196 | pathogenic | -1.432 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
Y/M | 0.9472 | likely_pathogenic | 0.9244 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Y/N | 0.7565 | likely_pathogenic | 0.7482 | pathogenic | -2.529 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.572357716 | None | None | N |
Y/P | 0.9957 | likely_pathogenic | 0.9953 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/Q | 0.9492 | likely_pathogenic | 0.9331 | pathogenic | -2.28 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/R | 0.9432 | likely_pathogenic | 0.9173 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/S | 0.8617 | likely_pathogenic | 0.8344 | pathogenic | -3.134 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.515972074 | None | None | N |
Y/T | 0.946 | likely_pathogenic | 0.9248 | pathogenic | -2.825 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
Y/V | 0.8618 | likely_pathogenic | 0.7944 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Y/W | 0.7405 | likely_pathogenic | 0.7211 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.