Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1142 | 3649;3650;3651 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
N2AB | 1142 | 3649;3650;3651 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
N2A | 1142 | 3649;3650;3651 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
N2B | 1096 | 3511;3512;3513 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
Novex-1 | 1096 | 3511;3512;3513 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
Novex-2 | 1096 | 3511;3512;3513 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
Novex-3 | 1142 | 3649;3650;3651 | chr2:178781220;178781219;178781218 | chr2:179645947;179645946;179645945 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.625 | N | 0.527 | 0.34 | 0.598413393357 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2723 | likely_benign | 0.2354 | benign | -1.599 | Destabilizing | 0.625 | D | 0.408 | neutral | N | 0.507091466 | None | None | N |
V/C | 0.8785 | likely_pathogenic | 0.8299 | pathogenic | -1.333 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
V/D | 0.5341 | ambiguous | 0.4655 | ambiguous | -1.253 | Destabilizing | 0.525 | D | 0.529 | neutral | None | None | None | None | N |
V/E | 0.2243 | likely_benign | 0.1932 | benign | -1.153 | Destabilizing | 0.002 | N | 0.448 | neutral | N | 0.453418675 | None | None | N |
V/F | 0.2743 | likely_benign | 0.2405 | benign | -0.967 | Destabilizing | 0.991 | D | 0.573 | neutral | None | None | None | None | N |
V/G | 0.4401 | ambiguous | 0.3793 | ambiguous | -2.02 | Highly Destabilizing | 0.801 | D | 0.581 | neutral | D | 0.570632147 | None | None | N |
V/H | 0.6496 | likely_pathogenic | 0.5912 | pathogenic | -1.582 | Destabilizing | 0.974 | D | 0.634 | neutral | None | None | None | None | N |
V/I | 0.0895 | likely_benign | 0.088 | benign | -0.502 | Destabilizing | 0.817 | D | 0.537 | neutral | None | None | None | None | N |
V/K | 0.5348 | ambiguous | 0.4892 | ambiguous | -1.313 | Destabilizing | 0.525 | D | 0.537 | neutral | None | None | None | None | N |
V/L | 0.2122 | likely_benign | 0.1952 | benign | -0.502 | Destabilizing | 0.625 | D | 0.527 | neutral | N | 0.440044455 | None | None | N |
V/M | 0.1569 | likely_benign | 0.1361 | benign | -0.581 | Destabilizing | 0.989 | D | 0.559 | neutral | N | 0.496319001 | None | None | N |
V/N | 0.4126 | ambiguous | 0.3534 | ambiguous | -1.297 | Destabilizing | 0.842 | D | 0.584 | neutral | None | None | None | None | N |
V/P | 0.9925 | likely_pathogenic | 0.992 | pathogenic | -0.834 | Destabilizing | 0.915 | D | 0.591 | neutral | None | None | None | None | N |
V/Q | 0.3475 | ambiguous | 0.3063 | benign | -1.295 | Destabilizing | 0.728 | D | 0.569 | neutral | None | None | None | None | N |
V/R | 0.5307 | ambiguous | 0.494 | ambiguous | -1.02 | Destabilizing | 0.842 | D | 0.591 | neutral | None | None | None | None | N |
V/S | 0.3105 | likely_benign | 0.2642 | benign | -1.979 | Destabilizing | 0.842 | D | 0.563 | neutral | None | None | None | None | N |
V/T | 0.233 | likely_benign | 0.1971 | benign | -1.746 | Destabilizing | 0.688 | D | 0.536 | neutral | None | None | None | None | N |
V/W | 0.91 | likely_pathogenic | 0.8903 | pathogenic | -1.248 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | N |
V/Y | 0.7007 | likely_pathogenic | 0.6689 | pathogenic | -0.91 | Destabilizing | 0.991 | D | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.