Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1144 | 3655;3656;3657 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
N2AB | 1144 | 3655;3656;3657 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
N2A | 1144 | 3655;3656;3657 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
N2B | 1098 | 3517;3518;3519 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
Novex-1 | 1098 | 3517;3518;3519 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
Novex-2 | 1098 | 3517;3518;3519 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
Novex-3 | 1144 | 3655;3656;3657 | chr2:178781214;178781213;178781212 | chr2:179645941;179645940;179645939 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | N | 0.673 | 0.706 | 0.530211221528 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1806 | likely_benign | 0.1749 | benign | -0.803 | Destabilizing | 0.997 | D | 0.429 | neutral | N | 0.489198032 | None | None | I |
S/C | 0.4763 | ambiguous | 0.4481 | ambiguous | -0.678 | Destabilizing | 1.0 | D | 0.626 | neutral | N | 0.514075182 | None | None | I |
S/D | 0.8075 | likely_pathogenic | 0.8253 | pathogenic | -0.656 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | I |
S/E | 0.872 | likely_pathogenic | 0.883 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | I |
S/F | 0.5649 | likely_pathogenic | 0.5953 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.511920377 | None | None | I |
S/G | 0.2671 | likely_benign | 0.2515 | benign | -1.024 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
S/H | 0.7312 | likely_pathogenic | 0.7341 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
S/I | 0.6771 | likely_pathogenic | 0.6624 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
S/K | 0.9642 | likely_pathogenic | 0.9678 | pathogenic | -0.705 | Destabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | I |
S/L | 0.3131 | likely_benign | 0.3063 | benign | -0.32 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | I |
S/M | 0.5149 | ambiguous | 0.5061 | ambiguous | 0.051 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
S/N | 0.3985 | ambiguous | 0.3762 | ambiguous | -0.738 | Destabilizing | 0.999 | D | 0.534 | neutral | None | None | None | None | I |
S/P | 0.8782 | likely_pathogenic | 0.8169 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.496472565 | None | None | I |
S/Q | 0.8309 | likely_pathogenic | 0.8356 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
S/R | 0.9383 | likely_pathogenic | 0.9412 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
S/T | 0.195 | likely_benign | 0.1956 | benign | -0.743 | Destabilizing | 0.999 | D | 0.443 | neutral | N | 0.462091808 | None | None | I |
S/V | 0.626 | likely_pathogenic | 0.6143 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
S/W | 0.7598 | likely_pathogenic | 0.7598 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
S/Y | 0.5047 | ambiguous | 0.5308 | ambiguous | -0.791 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | N | 0.499204208 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.