Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1301 | 4126;4127;4128 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
N2AB | 1301 | 4126;4127;4128 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
N2A | 1301 | 4126;4127;4128 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
N2B | 1255 | 3988;3989;3990 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
Novex-1 | 1255 | 3988;3989;3990 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
Novex-2 | 1255 | 3988;3989;3990 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
Novex-3 | 1301 | 4126;4127;4128 | chr2:178779291;178779290;178779289 | chr2:179644018;179644017;179644016 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.939 | N | 0.543 | 0.471 | 0.5452609689 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85739E-06 | 0 | 0 |
R/K | None | None | 0.76 | N | 0.583 | 0.247 | 0.260249123532 | gnomAD-4.0.0 | 1.20069E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31292E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8988 | likely_pathogenic | 0.9031 | pathogenic | -0.286 | Destabilizing | 0.953 | D | 0.593 | neutral | None | None | None | None | I |
R/C | 0.586 | likely_pathogenic | 0.5399 | ambiguous | -0.427 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
R/D | 0.9712 | likely_pathogenic | 0.9752 | pathogenic | 0.007 | Stabilizing | 0.986 | D | 0.57 | neutral | None | None | None | None | I |
R/E | 0.8326 | likely_pathogenic | 0.8469 | pathogenic | 0.113 | Stabilizing | 0.91 | D | 0.604 | neutral | None | None | None | None | I |
R/F | 0.956 | likely_pathogenic | 0.9591 | pathogenic | -0.32 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | I |
R/G | 0.8514 | likely_pathogenic | 0.8587 | pathogenic | -0.537 | Destabilizing | 0.939 | D | 0.543 | neutral | N | 0.510785408 | None | None | I |
R/H | 0.2518 | likely_benign | 0.2461 | benign | -1.017 | Destabilizing | 0.993 | D | 0.647 | neutral | None | None | None | None | I |
R/I | 0.8343 | likely_pathogenic | 0.825 | pathogenic | 0.36 | Stabilizing | 0.991 | D | 0.687 | prob.neutral | N | 0.48885559 | None | None | I |
R/K | 0.2842 | likely_benign | 0.2704 | benign | -0.282 | Destabilizing | 0.76 | D | 0.583 | neutral | N | 0.450311525 | None | None | I |
R/L | 0.7517 | likely_pathogenic | 0.7498 | pathogenic | 0.36 | Stabilizing | 0.953 | D | 0.543 | neutral | None | None | None | None | I |
R/M | 0.8587 | likely_pathogenic | 0.8587 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | I |
R/N | 0.9395 | likely_pathogenic | 0.9459 | pathogenic | -0.068 | Destabilizing | 0.986 | D | 0.633 | neutral | None | None | None | None | I |
R/P | 0.9711 | likely_pathogenic | 0.9812 | pathogenic | 0.166 | Stabilizing | 0.993 | D | 0.662 | neutral | None | None | None | None | I |
R/Q | 0.2525 | likely_benign | 0.2483 | benign | -0.128 | Destabilizing | 0.386 | N | 0.376 | neutral | None | None | None | None | I |
R/S | 0.9035 | likely_pathogenic | 0.9046 | pathogenic | -0.562 | Destabilizing | 0.939 | D | 0.603 | neutral | N | 0.459876114 | None | None | I |
R/T | 0.7829 | likely_pathogenic | 0.7821 | pathogenic | -0.29 | Destabilizing | 0.982 | D | 0.587 | neutral | N | 0.441061262 | None | None | I |
R/V | 0.8389 | likely_pathogenic | 0.8302 | pathogenic | 0.166 | Stabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | I |
R/W | 0.6789 | likely_pathogenic | 0.6906 | pathogenic | -0.242 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
R/Y | 0.8729 | likely_pathogenic | 0.8823 | pathogenic | 0.122 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.