Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC13034132;4133;4134 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010
N2AB13034132;4133;4134 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010
N2A13034132;4133;4134 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010
N2B12573994;3995;3996 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010
Novex-112573994;3995;3996 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010
Novex-212573994;3995;3996 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010
Novex-313034132;4133;4134 chr2:178779285;178779284;178779283chr2:179644012;179644011;179644010

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-5
  • Domain position: 13
  • Structural Position: 18
  • Q(SASA): 0.7882
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I None None 0.033 N 0.405 0.054 0.421920138742 gnomAD-4.0.0 1.36846E-06 None None None None I None 0 0 None 0 0 None 0 1.73491E-04 0 0 1.65612E-05
L/P rs1407839718 -0.327 0.912 N 0.483 0.576 0.813802140646 gnomAD-2.1.1 4E-06 None None None None I None 0 0 None 0 5.45E-05 None 0 None 0 0 0
L/P rs1407839718 -0.327 0.912 N 0.483 0.576 0.813802140646 gnomAD-4.0.0 1.36846E-06 None None None None I None 0 0 None 0 5.04414E-05 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2355 likely_benign 0.2732 benign -0.894 Destabilizing 0.241 N 0.415 neutral None None None None I
L/C 0.7057 likely_pathogenic 0.7334 pathogenic -0.672 Destabilizing 0.944 D 0.439 neutral None None None None I
L/D 0.7986 likely_pathogenic 0.85 pathogenic -0.397 Destabilizing 0.818 D 0.482 neutral None None None None I
L/E 0.4503 ambiguous 0.5206 ambiguous -0.454 Destabilizing 0.818 D 0.495 neutral None None None None I
L/F 0.1626 likely_benign 0.1935 benign -0.672 Destabilizing 0.001 N 0.289 neutral N 0.490476701 None None I
L/G 0.5676 likely_pathogenic 0.6405 pathogenic -1.117 Destabilizing 0.818 D 0.481 neutral None None None None I
L/H 0.3077 likely_benign 0.3757 ambiguous -0.294 Destabilizing 0.975 D 0.479 neutral N 0.510569004 None None I
L/I 0.1186 likely_benign 0.1321 benign -0.406 Destabilizing 0.033 N 0.405 neutral N 0.474196928 None None I
L/K 0.3072 likely_benign 0.3605 ambiguous -0.591 Destabilizing 0.818 D 0.483 neutral None None None None I
L/M 0.1151 likely_benign 0.1274 benign -0.446 Destabilizing 0.024 N 0.284 neutral None None None None I
L/N 0.4968 ambiguous 0.5811 pathogenic -0.401 Destabilizing 0.932 D 0.483 neutral None None None None I
L/P 0.3275 likely_benign 0.4065 ambiguous -0.536 Destabilizing 0.912 D 0.483 neutral N 0.485538884 None None I
L/Q 0.1681 likely_benign 0.2064 benign -0.604 Destabilizing 0.818 D 0.488 neutral None None None None I
L/R 0.2134 likely_benign 0.2552 benign 0.001 Stabilizing 0.773 D 0.493 neutral N 0.482197364 None None I
L/S 0.2959 likely_benign 0.3526 ambiguous -0.895 Destabilizing 0.69 D 0.478 neutral None None None None I
L/T 0.2049 likely_benign 0.2469 benign -0.84 Destabilizing 0.388 N 0.454 neutral None None None None I
L/V 0.1077 likely_benign 0.1242 benign -0.536 Destabilizing 0.001 N 0.263 neutral N 0.421744186 None None I
L/W 0.3101 likely_benign 0.3775 ambiguous -0.698 Destabilizing 0.981 D 0.497 neutral None None None None I
L/Y 0.4449 ambiguous 0.5237 ambiguous -0.47 Destabilizing 0.527 D 0.431 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.