Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1337 | 4234;4235;4236 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
N2AB | 1337 | 4234;4235;4236 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
N2A | 1337 | 4234;4235;4236 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
N2B | 1291 | 4096;4097;4098 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
Novex-1 | 1291 | 4096;4097;4098 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
Novex-2 | 1291 | 4096;4097;4098 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
Novex-3 | 1337 | 4234;4235;4236 | chr2:178779073;178779072;178779071 | chr2:179643800;179643799;179643798 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.059 | N | 0.384 | 0.411 | 0.336400405673 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9877 | likely_pathogenic | 0.9895 | pathogenic | -2.783 | Highly Destabilizing | 0.919 | D | 0.657 | neutral | None | None | None | None | N |
Y/C | 0.7949 | likely_pathogenic | 0.8403 | pathogenic | -1.801 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | D | 0.581627927 | None | None | N |
Y/D | 0.9903 | likely_pathogenic | 0.9898 | pathogenic | -2.266 | Highly Destabilizing | 0.938 | D | 0.74 | deleterious | D | 0.675575731 | None | None | N |
Y/E | 0.9954 | likely_pathogenic | 0.9953 | pathogenic | -2.1 | Highly Destabilizing | 0.976 | D | 0.695 | prob.neutral | None | None | None | None | N |
Y/F | 0.1999 | likely_benign | 0.2077 | benign | -1.078 | Destabilizing | 0.026 | N | 0.368 | neutral | N | 0.507230402 | None | None | N |
Y/G | 0.9701 | likely_pathogenic | 0.9748 | pathogenic | -3.187 | Highly Destabilizing | 0.919 | D | 0.703 | prob.neutral | None | None | None | None | N |
Y/H | 0.8691 | likely_pathogenic | 0.9044 | pathogenic | -1.694 | Destabilizing | 0.059 | N | 0.384 | neutral | N | 0.512558387 | None | None | N |
Y/I | 0.9499 | likely_pathogenic | 0.9427 | pathogenic | -1.487 | Destabilizing | 0.952 | D | 0.706 | prob.neutral | None | None | None | None | N |
Y/K | 0.994 | likely_pathogenic | 0.9946 | pathogenic | -2.061 | Highly Destabilizing | 0.976 | D | 0.706 | prob.neutral | None | None | None | None | N |
Y/L | 0.9248 | likely_pathogenic | 0.9222 | pathogenic | -1.487 | Destabilizing | 0.851 | D | 0.607 | neutral | None | None | None | None | N |
Y/M | 0.976 | likely_pathogenic | 0.9752 | pathogenic | -1.265 | Destabilizing | 0.997 | D | 0.696 | prob.neutral | None | None | None | None | N |
Y/N | 0.9415 | likely_pathogenic | 0.9443 | pathogenic | -2.666 | Highly Destabilizing | 0.211 | N | 0.487 | neutral | D | 0.635526245 | None | None | N |
Y/P | 0.996 | likely_pathogenic | 0.9957 | pathogenic | -1.925 | Destabilizing | 0.996 | D | 0.798 | deleterious | None | None | None | None | N |
Y/Q | 0.9917 | likely_pathogenic | 0.993 | pathogenic | -2.436 | Highly Destabilizing | 0.976 | D | 0.743 | deleterious | None | None | None | None | N |
Y/R | 0.9815 | likely_pathogenic | 0.9842 | pathogenic | -1.792 | Destabilizing | 0.976 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/S | 0.9621 | likely_pathogenic | 0.9678 | pathogenic | -3.147 | Highly Destabilizing | 0.896 | D | 0.677 | prob.neutral | N | 0.507214285 | None | None | N |
Y/T | 0.9842 | likely_pathogenic | 0.9857 | pathogenic | -2.862 | Highly Destabilizing | 0.976 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/V | 0.9191 | likely_pathogenic | 0.9162 | pathogenic | -1.925 | Destabilizing | 0.919 | D | 0.655 | neutral | None | None | None | None | N |
Y/W | 0.7668 | likely_pathogenic | 0.792 | pathogenic | -0.515 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.