Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13693 | 41302;41303;41304 | chr2:178636650;178636649;178636648 | chr2:179501377;179501376;179501375 |
N2AB | 12052 | 36379;36380;36381 | chr2:178636650;178636649;178636648 | chr2:179501377;179501376;179501375 |
N2A | 11125 | 33598;33599;33600 | chr2:178636650;178636649;178636648 | chr2:179501377;179501376;179501375 |
N2B | 4628 | 14107;14108;14109 | chr2:178636650;178636649;178636648 | chr2:179501377;179501376;179501375 |
Novex-1 | 4753 | 14482;14483;14484 | chr2:178636650;178636649;178636648 | chr2:179501377;179501376;179501375 |
Novex-2 | 4820 | 14683;14684;14685 | chr2:178636650;178636649;178636648 | chr2:179501377;179501376;179501375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.001 | N | 0.367 | 0.258 | 0.619501705969 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85989E-06 | 0 | 0 |
I/V | None | None | None | N | 0.11 | 0.116 | 0.170165803431 | gnomAD-4.0.0 | 6.36894E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14395E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5592 | ambiguous | 0.4221 | ambiguous | -1.068 | Destabilizing | None | N | 0.245 | neutral | None | None | None | None | I |
I/C | 0.8195 | likely_pathogenic | 0.7602 | pathogenic | -0.913 | Destabilizing | 0.132 | N | 0.571 | neutral | None | None | None | None | I |
I/D | 0.8617 | likely_pathogenic | 0.7712 | pathogenic | -0.673 | Destabilizing | 0.008 | N | 0.335 | neutral | None | None | None | None | I |
I/E | 0.702 | likely_pathogenic | 0.6064 | pathogenic | -0.691 | Destabilizing | 0.002 | N | 0.411 | neutral | None | None | None | None | I |
I/F | 0.3235 | likely_benign | 0.2531 | benign | -0.664 | Destabilizing | 0.007 | N | 0.26 | neutral | N | 0.497788296 | None | None | I |
I/G | 0.8421 | likely_pathogenic | 0.7288 | pathogenic | -1.33 | Destabilizing | 0.003 | N | 0.383 | neutral | None | None | None | None | I |
I/H | 0.6358 | likely_pathogenic | 0.5135 | ambiguous | -0.453 | Destabilizing | 0.316 | N | 0.636 | neutral | None | None | None | None | I |
I/K | 0.5501 | ambiguous | 0.4373 | ambiguous | -0.878 | Destabilizing | None | N | 0.371 | neutral | None | None | None | None | I |
I/L | 0.2234 | likely_benign | 0.1682 | benign | -0.451 | Destabilizing | None | N | 0.112 | neutral | N | 0.471804842 | None | None | I |
I/M | 0.2446 | likely_benign | 0.1737 | benign | -0.572 | Destabilizing | 0.007 | N | 0.409 | neutral | N | 0.482542067 | None | None | I |
I/N | 0.4541 | ambiguous | 0.3341 | benign | -0.816 | Destabilizing | 0.006 | N | 0.361 | neutral | N | 0.463668937 | None | None | I |
I/P | 0.9277 | likely_pathogenic | 0.861 | pathogenic | -0.624 | Destabilizing | 0.008 | N | 0.343 | neutral | None | None | None | None | I |
I/Q | 0.5839 | likely_pathogenic | 0.4568 | ambiguous | -0.965 | Destabilizing | 0.004 | N | 0.359 | neutral | None | None | None | None | I |
I/R | 0.452 | ambiguous | 0.366 | ambiguous | -0.292 | Destabilizing | 0.002 | N | 0.345 | neutral | None | None | None | None | I |
I/S | 0.4746 | ambiguous | 0.3526 | ambiguous | -1.318 | Destabilizing | 0.001 | N | 0.367 | neutral | N | 0.445816768 | None | None | I |
I/T | 0.2903 | likely_benign | 0.2199 | benign | -1.221 | Destabilizing | None | N | 0.29 | neutral | N | 0.382177054 | None | None | I |
I/V | 0.0671 | likely_benign | 0.0577 | benign | -0.624 | Destabilizing | None | N | 0.11 | neutral | N | 0.35728742 | None | None | I |
I/W | 0.9297 | likely_pathogenic | 0.8908 | pathogenic | -0.728 | Destabilizing | 0.316 | N | 0.595 | neutral | None | None | None | None | I |
I/Y | 0.6542 | likely_pathogenic | 0.6041 | pathogenic | -0.503 | Destabilizing | 0.018 | N | 0.339 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.