Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13694 | 41305;41306;41307 | chr2:178636647;178636646;178636645 | chr2:179501374;179501373;179501372 |
N2AB | 12053 | 36382;36383;36384 | chr2:178636647;178636646;178636645 | chr2:179501374;179501373;179501372 |
N2A | 11126 | 33601;33602;33603 | chr2:178636647;178636646;178636645 | chr2:179501374;179501373;179501372 |
N2B | 4629 | 14110;14111;14112 | chr2:178636647;178636646;178636645 | chr2:179501374;179501373;179501372 |
Novex-1 | 4754 | 14485;14486;14487 | chr2:178636647;178636646;178636645 | chr2:179501374;179501373;179501372 |
Novex-2 | 4821 | 14686;14687;14688 | chr2:178636647;178636646;178636645 | chr2:179501374;179501373;179501372 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.749 | 0.416 | 0.74495810933 | gnomAD-4.0.0 | 1.59223E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
L/S | None | None | 1.0 | D | 0.805 | 0.618 | 0.796996417136 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9301 | likely_pathogenic | 0.8946 | pathogenic | -2.353 | Highly Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/C | 0.9615 | likely_pathogenic | 0.9349 | pathogenic | -1.687 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/D | 0.9981 | likely_pathogenic | 0.9962 | pathogenic | -2.468 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/E | 0.9844 | likely_pathogenic | 0.9712 | pathogenic | -2.308 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/F | 0.7751 | likely_pathogenic | 0.6829 | pathogenic | -1.444 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.543893063 | None | None | N |
L/G | 0.9882 | likely_pathogenic | 0.9844 | pathogenic | -2.836 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/H | 0.9568 | likely_pathogenic | 0.9231 | pathogenic | -2.216 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/I | 0.3373 | likely_benign | 0.2403 | benign | -0.997 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
L/K | 0.9422 | likely_pathogenic | 0.9187 | pathogenic | -1.895 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/M | 0.4772 | ambiguous | 0.3818 | ambiguous | -0.915 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.540569798 | None | None | N |
L/N | 0.9874 | likely_pathogenic | 0.9773 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/P | 0.9938 | likely_pathogenic | 0.985 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/Q | 0.9213 | likely_pathogenic | 0.8601 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/R | 0.917 | likely_pathogenic | 0.8764 | pathogenic | -1.458 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/S | 0.9849 | likely_pathogenic | 0.9677 | pathogenic | -2.739 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.540241411 | None | None | N |
L/T | 0.9417 | likely_pathogenic | 0.9082 | pathogenic | -2.448 | Highly Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
L/V | 0.4361 | ambiguous | 0.3058 | benign | -1.426 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.363677561 | None | None | N |
L/W | 0.9598 | likely_pathogenic | 0.9371 | pathogenic | -1.776 | Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.593696655 | None | None | N |
L/Y | 0.9597 | likely_pathogenic | 0.9414 | pathogenic | -1.494 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.