Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13695 | 41308;41309;41310 | chr2:178636644;178636643;178636642 | chr2:179501371;179501370;179501369 |
N2AB | 12054 | 36385;36386;36387 | chr2:178636644;178636643;178636642 | chr2:179501371;179501370;179501369 |
N2A | 11127 | 33604;33605;33606 | chr2:178636644;178636643;178636642 | chr2:179501371;179501370;179501369 |
N2B | 4630 | 14113;14114;14115 | chr2:178636644;178636643;178636642 | chr2:179501371;179501370;179501369 |
Novex-1 | 4755 | 14488;14489;14490 | chr2:178636644;178636643;178636642 | chr2:179501371;179501370;179501369 |
Novex-2 | 4822 | 14689;14690;14691 | chr2:178636644;178636643;178636642 | chr2:179501371;179501370;179501369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.062 | N | 0.485 | 0.071 | 0.225215365344 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1744 | likely_benign | 0.1295 | benign | -0.829 | Destabilizing | 0.027 | N | 0.385 | neutral | N | 0.456935694 | None | None | N |
T/C | 0.8029 | likely_pathogenic | 0.7502 | pathogenic | -0.548 | Destabilizing | 0.935 | D | 0.491 | neutral | None | None | None | None | N |
T/D | 0.6092 | likely_pathogenic | 0.5384 | ambiguous | 0.004 | Stabilizing | 0.149 | N | 0.451 | neutral | None | None | None | None | N |
T/E | 0.3619 | ambiguous | 0.3181 | benign | 0.047 | Stabilizing | 0.035 | N | 0.421 | neutral | None | None | None | None | N |
T/F | 0.7086 | likely_pathogenic | 0.6548 | pathogenic | -0.786 | Destabilizing | 0.791 | D | 0.583 | neutral | None | None | None | None | N |
T/G | 0.3485 | ambiguous | 0.2837 | benign | -1.124 | Destabilizing | 0.149 | N | 0.502 | neutral | None | None | None | None | N |
T/H | 0.431 | ambiguous | 0.3456 | ambiguous | -1.308 | Destabilizing | 0.555 | D | 0.561 | neutral | None | None | None | None | N |
T/I | 0.5357 | ambiguous | 0.493 | ambiguous | -0.127 | Destabilizing | 0.484 | N | 0.531 | neutral | N | 0.48174152 | None | None | N |
T/K | 0.1483 | likely_benign | 0.1275 | benign | -0.556 | Destabilizing | None | N | 0.197 | neutral | N | 0.430046525 | None | None | N |
T/L | 0.2519 | likely_benign | 0.2048 | benign | -0.127 | Destabilizing | 0.149 | N | 0.491 | neutral | None | None | None | None | N |
T/M | 0.203 | likely_benign | 0.1705 | benign | -0.034 | Destabilizing | 0.791 | D | 0.501 | neutral | None | None | None | None | N |
T/N | 0.2286 | likely_benign | 0.1841 | benign | -0.629 | Destabilizing | 0.149 | N | 0.444 | neutral | None | None | None | None | N |
T/P | 0.2441 | likely_benign | 0.1438 | benign | -0.328 | Destabilizing | 0.211 | N | 0.533 | neutral | N | 0.472643997 | None | None | N |
T/Q | 0.2023 | likely_benign | 0.178 | benign | -0.687 | Destabilizing | 0.002 | N | 0.216 | neutral | None | None | None | None | N |
T/R | 0.2132 | likely_benign | 0.1666 | benign | -0.429 | Destabilizing | 0.062 | N | 0.485 | neutral | N | 0.467835469 | None | None | N |
T/S | 0.1857 | likely_benign | 0.1447 | benign | -0.961 | Destabilizing | 0.027 | N | 0.442 | neutral | N | 0.445703448 | None | None | N |
T/V | 0.3796 | ambiguous | 0.3502 | ambiguous | -0.328 | Destabilizing | 0.149 | N | 0.451 | neutral | None | None | None | None | N |
T/W | 0.8813 | likely_pathogenic | 0.8679 | pathogenic | -0.737 | Destabilizing | 0.935 | D | 0.581 | neutral | None | None | None | None | N |
T/Y | 0.683 | likely_pathogenic | 0.6429 | pathogenic | -0.478 | Destabilizing | 0.791 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.