Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13732 | 41419;41420;41421 | chr2:178636533;178636532;178636531 | chr2:179501260;179501259;179501258 |
N2AB | 12091 | 36496;36497;36498 | chr2:178636533;178636532;178636531 | chr2:179501260;179501259;179501258 |
N2A | 11164 | 33715;33716;33717 | chr2:178636533;178636532;178636531 | chr2:179501260;179501259;179501258 |
N2B | 4667 | 14224;14225;14226 | chr2:178636533;178636532;178636531 | chr2:179501260;179501259;179501258 |
Novex-1 | 4792 | 14599;14600;14601 | chr2:178636533;178636532;178636531 | chr2:179501260;179501259;179501258 |
Novex-2 | 4859 | 14800;14801;14802 | chr2:178636533;178636532;178636531 | chr2:179501260;179501259;179501258 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.999 | N | 0.476 | 0.407 | 0.340032825777 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88274E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9123 | likely_pathogenic | 0.9632 | pathogenic | -1.82 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
H/C | 0.4846 | ambiguous | 0.5667 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
H/D | 0.9534 | likely_pathogenic | 0.9834 | pathogenic | -1.729 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.513363795 | None | None | N |
H/E | 0.9269 | likely_pathogenic | 0.9761 | pathogenic | -1.52 | Destabilizing | 0.999 | D | 0.466 | neutral | None | None | None | None | N |
H/F | 0.3661 | ambiguous | 0.5685 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
H/G | 0.9481 | likely_pathogenic | 0.9823 | pathogenic | -2.262 | Highly Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
H/I | 0.6296 | likely_pathogenic | 0.8201 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
H/K | 0.9303 | likely_pathogenic | 0.9698 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
H/L | 0.3419 | ambiguous | 0.5465 | ambiguous | -0.508 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.498608509 | None | None | N |
H/M | 0.7766 | likely_pathogenic | 0.8911 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
H/N | 0.5187 | ambiguous | 0.728 | pathogenic | -1.904 | Destabilizing | 0.999 | D | 0.476 | neutral | N | 0.512721423 | None | None | N |
H/P | 0.9704 | likely_pathogenic | 0.9842 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.510642928 | None | None | N |
H/Q | 0.7662 | likely_pathogenic | 0.9113 | pathogenic | -1.467 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.510637132 | None | None | N |
H/R | 0.7805 | likely_pathogenic | 0.9032 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.511917922 | None | None | N |
H/S | 0.8364 | likely_pathogenic | 0.93 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
H/T | 0.8097 | likely_pathogenic | 0.9233 | pathogenic | -1.714 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
H/V | 0.5741 | likely_pathogenic | 0.7733 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
H/W | 0.5758 | likely_pathogenic | 0.7217 | pathogenic | 0.764 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
H/Y | 0.0976 | likely_benign | 0.1705 | benign | 0.55 | Stabilizing | 0.999 | D | 0.526 | neutral | N | 0.438473263 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.