Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13733 | 41422;41423;41424 | chr2:178636530;178636529;178636528 | chr2:179501257;179501256;179501255 |
N2AB | 12092 | 36499;36500;36501 | chr2:178636530;178636529;178636528 | chr2:179501257;179501256;179501255 |
N2A | 11165 | 33718;33719;33720 | chr2:178636530;178636529;178636528 | chr2:179501257;179501256;179501255 |
N2B | 4668 | 14227;14228;14229 | chr2:178636530;178636529;178636528 | chr2:179501257;179501256;179501255 |
Novex-1 | 4793 | 14602;14603;14604 | chr2:178636530;178636529;178636528 | chr2:179501257;179501256;179501255 |
Novex-2 | 4860 | 14803;14804;14805 | chr2:178636530;178636529;178636528 | chr2:179501257;179501256;179501255 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1026532541 | None | 0.002 | N | 0.104 | 0.097 | 0.259761712551 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/K | rs1026532541 | None | 0.002 | N | 0.104 | 0.097 | 0.259761712551 | gnomAD-4.0.0 | 1.31572E-05 | None | None | None | None | N | None | 4.82789E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9452 | likely_pathogenic | 0.9619 | pathogenic | -0.67 | Destabilizing | 0.688 | D | 0.394 | neutral | None | None | None | None | N |
R/C | 0.764 | likely_pathogenic | 0.7902 | pathogenic | -0.563 | Destabilizing | 0.998 | D | 0.452 | neutral | None | None | None | None | N |
R/D | 0.9846 | likely_pathogenic | 0.9879 | pathogenic | 0.061 | Stabilizing | 0.842 | D | 0.466 | neutral | None | None | None | None | N |
R/E | 0.895 | likely_pathogenic | 0.9201 | pathogenic | 0.212 | Stabilizing | 0.525 | D | 0.388 | neutral | None | None | None | None | N |
R/F | 0.9682 | likely_pathogenic | 0.9752 | pathogenic | -0.403 | Destabilizing | 0.991 | D | 0.479 | neutral | None | None | None | None | N |
R/G | 0.9286 | likely_pathogenic | 0.9411 | pathogenic | -1.001 | Destabilizing | 0.801 | D | 0.463 | neutral | N | 0.50724639 | None | None | N |
R/H | 0.3357 | likely_benign | 0.3998 | ambiguous | -1.403 | Destabilizing | 0.991 | D | 0.461 | neutral | None | None | None | None | N |
R/I | 0.8165 | likely_pathogenic | 0.8328 | pathogenic | 0.225 | Stabilizing | 0.974 | D | 0.487 | neutral | None | None | None | None | N |
R/K | 0.2761 | likely_benign | 0.3091 | benign | -0.496 | Destabilizing | 0.002 | N | 0.104 | neutral | N | 0.480680471 | None | None | N |
R/L | 0.7801 | likely_pathogenic | 0.8181 | pathogenic | 0.225 | Stabilizing | 0.842 | D | 0.463 | neutral | None | None | None | None | N |
R/M | 0.8883 | likely_pathogenic | 0.9063 | pathogenic | -0.228 | Destabilizing | 0.989 | D | 0.479 | neutral | D | 0.591736491 | None | None | N |
R/N | 0.9562 | likely_pathogenic | 0.9692 | pathogenic | -0.133 | Destabilizing | 0.842 | D | 0.41 | neutral | None | None | None | None | N |
R/P | 0.9956 | likely_pathogenic | 0.9971 | pathogenic | -0.052 | Destabilizing | 0.915 | D | 0.481 | neutral | None | None | None | None | N |
R/Q | 0.3513 | ambiguous | 0.415 | ambiguous | -0.195 | Destabilizing | 0.842 | D | 0.423 | neutral | None | None | None | None | N |
R/S | 0.9479 | likely_pathogenic | 0.9597 | pathogenic | -0.852 | Destabilizing | 0.625 | D | 0.445 | neutral | N | 0.498006338 | None | None | N |
R/T | 0.8496 | likely_pathogenic | 0.8841 | pathogenic | -0.5 | Destabilizing | 0.801 | D | 0.47 | neutral | N | 0.512448086 | None | None | N |
R/V | 0.8516 | likely_pathogenic | 0.8862 | pathogenic | -0.052 | Destabilizing | 0.915 | D | 0.492 | neutral | None | None | None | None | N |
R/W | 0.8002 | likely_pathogenic | 0.8065 | pathogenic | -0.111 | Destabilizing | 0.997 | D | 0.485 | neutral | D | 0.593302614 | None | None | N |
R/Y | 0.9012 | likely_pathogenic | 0.9209 | pathogenic | 0.177 | Stabilizing | 0.991 | D | 0.482 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.