Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13744 | 41455;41456;41457 | chr2:178636497;178636496;178636495 | chr2:179501224;179501223;179501222 |
N2AB | 12103 | 36532;36533;36534 | chr2:178636497;178636496;178636495 | chr2:179501224;179501223;179501222 |
N2A | 11176 | 33751;33752;33753 | chr2:178636497;178636496;178636495 | chr2:179501224;179501223;179501222 |
N2B | 4679 | 14260;14261;14262 | chr2:178636497;178636496;178636495 | chr2:179501224;179501223;179501222 |
Novex-1 | 4804 | 14635;14636;14637 | chr2:178636497;178636496;178636495 | chr2:179501224;179501223;179501222 |
Novex-2 | 4871 | 14836;14837;14838 | chr2:178636497;178636496;178636495 | chr2:179501224;179501223;179501222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.01 | N | 0.267 | 0.164 | 0.263140351381 | gnomAD-4.0.0 | 6.84368E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99637E-07 | 0 | 0 |
H/R | None | None | 0.642 | N | 0.475 | 0.281 | 0.270889551736 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85954E-06 | 0 | 0 |
H/Y | rs1178244629 | 0.651 | 0.784 | N | 0.459 | 0.22 | 0.340273420219 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
H/Y | rs1178244629 | 0.651 | 0.784 | N | 0.459 | 0.22 | 0.340273420219 | gnomAD-4.0.0 | 2.0531E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69891E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8681 | likely_pathogenic | 0.8738 | pathogenic | -1.43 | Destabilizing | 0.495 | N | 0.473 | neutral | None | None | None | None | N |
H/C | 0.6308 | likely_pathogenic | 0.6438 | pathogenic | -0.652 | Destabilizing | 0.995 | D | 0.582 | neutral | None | None | None | None | N |
H/D | 0.9407 | likely_pathogenic | 0.9428 | pathogenic | -0.71 | Destabilizing | 0.27 | N | 0.515 | neutral | N | 0.497865821 | None | None | N |
H/E | 0.8785 | likely_pathogenic | 0.8835 | pathogenic | -0.563 | Destabilizing | 0.329 | N | 0.453 | neutral | None | None | None | None | N |
H/F | 0.6937 | likely_pathogenic | 0.7295 | pathogenic | 0.109 | Stabilizing | 0.893 | D | 0.57 | neutral | None | None | None | None | N |
H/G | 0.9574 | likely_pathogenic | 0.9616 | pathogenic | -1.831 | Destabilizing | 0.495 | N | 0.471 | neutral | None | None | None | None | N |
H/I | 0.7906 | likely_pathogenic | 0.8132 | pathogenic | -0.286 | Destabilizing | 0.543 | D | 0.541 | neutral | None | None | None | None | N |
H/K | 0.9098 | likely_pathogenic | 0.9154 | pathogenic | -1.041 | Destabilizing | 0.329 | N | 0.508 | neutral | None | None | None | None | N |
H/L | 0.3626 | ambiguous | 0.4067 | ambiguous | -0.286 | Destabilizing | 0.002 | N | 0.531 | neutral | N | 0.434213769 | None | None | N |
H/M | 0.795 | likely_pathogenic | 0.8254 | pathogenic | -0.492 | Destabilizing | 0.893 | D | 0.547 | neutral | None | None | None | None | N |
H/N | 0.546 | ambiguous | 0.5295 | ambiguous | -1.252 | Destabilizing | 0.01 | N | 0.267 | neutral | N | 0.433405433 | None | None | N |
H/P | 0.9852 | likely_pathogenic | 0.9884 | pathogenic | -0.651 | Destabilizing | 0.975 | D | 0.598 | neutral | N | 0.5109628 | None | None | N |
H/Q | 0.7001 | likely_pathogenic | 0.6964 | pathogenic | -0.929 | Destabilizing | 0.065 | N | 0.273 | neutral | N | 0.406256312 | None | None | N |
H/R | 0.746 | likely_pathogenic | 0.7512 | pathogenic | -1.358 | Destabilizing | 0.642 | D | 0.475 | neutral | N | 0.42388416 | None | None | N |
H/S | 0.7893 | likely_pathogenic | 0.7919 | pathogenic | -1.481 | Destabilizing | 0.495 | N | 0.475 | neutral | None | None | None | None | N |
H/T | 0.8779 | likely_pathogenic | 0.8916 | pathogenic | -1.221 | Destabilizing | 0.704 | D | 0.543 | neutral | None | None | None | None | N |
H/V | 0.7404 | likely_pathogenic | 0.769 | pathogenic | -0.651 | Destabilizing | 0.543 | D | 0.529 | neutral | None | None | None | None | N |
H/W | 0.7394 | likely_pathogenic | 0.7743 | pathogenic | 0.616 | Stabilizing | 0.995 | D | 0.573 | neutral | None | None | None | None | N |
H/Y | 0.3342 | likely_benign | 0.3414 | ambiguous | 0.578 | Stabilizing | 0.784 | D | 0.459 | neutral | N | 0.484623344 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.