Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13753 | 41482;41483;41484 | chr2:178636470;178636469;178636468 | chr2:179501197;179501196;179501195 |
N2AB | 12112 | 36559;36560;36561 | chr2:178636470;178636469;178636468 | chr2:179501197;179501196;179501195 |
N2A | 11185 | 33778;33779;33780 | chr2:178636470;178636469;178636468 | chr2:179501197;179501196;179501195 |
N2B | 4688 | 14287;14288;14289 | chr2:178636470;178636469;178636468 | chr2:179501197;179501196;179501195 |
Novex-1 | 4813 | 14662;14663;14664 | chr2:178636470;178636469;178636468 | chr2:179501197;179501196;179501195 |
Novex-2 | 4880 | 14863;14864;14865 | chr2:178636470;178636469;178636468 | chr2:179501197;179501196;179501195 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs1228071677 | None | 0.896 | N | 0.509 | 0.331 | 0.473853734676 | gnomAD-4.0.0 | 1.59229E-06 | None | None | None | None | N | None | 0 | 2.28718E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/S | None | None | 0.64 | N | 0.579 | 0.103 | 0.340273420219 | gnomAD-4.0.0 | 1.3688E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.819 | likely_pathogenic | 0.821 | pathogenic | -0.877 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
A/D | 0.8105 | likely_pathogenic | 0.828 | pathogenic | -0.458 | Destabilizing | 0.968 | D | 0.663 | neutral | N | 0.514945922 | None | None | N |
A/E | 0.5752 | likely_pathogenic | 0.6017 | pathogenic | -0.543 | Destabilizing | 0.976 | D | 0.601 | neutral | None | None | None | None | N |
A/F | 0.7956 | likely_pathogenic | 0.8278 | pathogenic | -0.938 | Destabilizing | 0.988 | D | 0.766 | deleterious | None | None | None | None | N |
A/G | 0.2588 | likely_benign | 0.2819 | benign | -0.825 | Destabilizing | 0.896 | D | 0.509 | neutral | N | 0.513583285 | None | None | N |
A/H | 0.8522 | likely_pathogenic | 0.8588 | pathogenic | -0.881 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/I | 0.6538 | likely_pathogenic | 0.6885 | pathogenic | -0.329 | Destabilizing | 0.976 | D | 0.64 | neutral | None | None | None | None | N |
A/K | 0.7498 | likely_pathogenic | 0.7862 | pathogenic | -0.881 | Destabilizing | 0.976 | D | 0.633 | neutral | None | None | None | None | N |
A/L | 0.5916 | likely_pathogenic | 0.616 | pathogenic | -0.329 | Destabilizing | 0.851 | D | 0.559 | neutral | None | None | None | None | N |
A/M | 0.5358 | ambiguous | 0.5682 | pathogenic | -0.336 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
A/N | 0.6698 | likely_pathogenic | 0.6793 | pathogenic | -0.566 | Destabilizing | 0.976 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/P | 0.9703 | likely_pathogenic | 0.9644 | pathogenic | -0.393 | Destabilizing | 0.984 | D | 0.681 | prob.neutral | D | 0.627796164 | None | None | N |
A/Q | 0.5933 | likely_pathogenic | 0.6011 | pathogenic | -0.762 | Destabilizing | 0.988 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/R | 0.6452 | likely_pathogenic | 0.6731 | pathogenic | -0.511 | Destabilizing | 0.988 | D | 0.681 | prob.neutral | None | None | None | None | N |
A/S | 0.1198 | likely_benign | 0.1219 | benign | -0.934 | Destabilizing | 0.64 | D | 0.579 | neutral | N | 0.482197364 | None | None | N |
A/T | 0.1616 | likely_benign | 0.1693 | benign | -0.918 | Destabilizing | 0.046 | N | 0.189 | neutral | N | 0.48700654 | None | None | N |
A/V | 0.3646 | ambiguous | 0.397 | ambiguous | -0.393 | Destabilizing | 0.811 | D | 0.521 | neutral | N | 0.505525853 | None | None | N |
A/W | 0.9753 | likely_pathogenic | 0.9775 | pathogenic | -1.158 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
A/Y | 0.891 | likely_pathogenic | 0.9036 | pathogenic | -0.776 | Destabilizing | 0.996 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.