Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1378 | 4357;4358;4359 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
N2AB | 1378 | 4357;4358;4359 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
N2A | 1378 | 4357;4358;4359 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
N2B | 1332 | 4219;4220;4221 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
Novex-1 | 1332 | 4219;4220;4221 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
Novex-2 | 1332 | 4219;4220;4221 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
Novex-3 | 1378 | 4357;4358;4359 | chr2:178778950;178778949;178778948 | chr2:179643677;179643676;179643675 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.615 | 0.488 | 0.435152311215 | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85714E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9745 | likely_pathogenic | 0.982 | pathogenic | -1.061 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/C | 0.9816 | likely_pathogenic | 0.9872 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/D | 0.9955 | likely_pathogenic | 0.9969 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
K/E | 0.9527 | likely_pathogenic | 0.9743 | pathogenic | -0.232 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.459422503 | None | None | N |
K/F | 0.9875 | likely_pathogenic | 0.9907 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/G | 0.9886 | likely_pathogenic | 0.9921 | pathogenic | -1.492 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
K/H | 0.8694 | likely_pathogenic | 0.9186 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/I | 0.9074 | likely_pathogenic | 0.9111 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.855 | deleterious | N | 0.502113448 | None | None | N |
K/L | 0.9121 | likely_pathogenic | 0.9285 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
K/M | 0.8575 | likely_pathogenic | 0.8922 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
K/N | 0.9822 | likely_pathogenic | 0.9885 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.746 | deleterious | N | 0.475259532 | None | None | N |
K/P | 0.9967 | likely_pathogenic | 0.9975 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
K/Q | 0.8017 | likely_pathogenic | 0.9 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.472675243 | None | None | N |
K/R | 0.252 | likely_benign | 0.3426 | ambiguous | -0.677 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.413890663 | None | None | N |
K/S | 0.9848 | likely_pathogenic | 0.991 | pathogenic | -1.679 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
K/T | 0.9185 | likely_pathogenic | 0.9376 | pathogenic | -1.238 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.449797027 | None | None | N |
K/V | 0.8999 | likely_pathogenic | 0.9116 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
K/W | 0.9898 | likely_pathogenic | 0.9937 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/Y | 0.9612 | likely_pathogenic | 0.9718 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.