Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13784 | 41575;41576;41577 | chr2:178636221;178636220;178636219 | chr2:179500948;179500947;179500946 |
N2AB | 12143 | 36652;36653;36654 | chr2:178636221;178636220;178636219 | chr2:179500948;179500947;179500946 |
N2A | 11216 | 33871;33872;33873 | chr2:178636221;178636220;178636219 | chr2:179500948;179500947;179500946 |
N2B | 4719 | 14380;14381;14382 | chr2:178636221;178636220;178636219 | chr2:179500948;179500947;179500946 |
Novex-1 | 4844 | 14755;14756;14757 | chr2:178636221;178636220;178636219 | chr2:179500948;179500947;179500946 |
Novex-2 | 4911 | 14956;14957;14958 | chr2:178636221;178636220;178636219 | chr2:179500948;179500947;179500946 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.638 | D | 0.54 | 0.248 | 0.274366138417 | gnomAD-4.0.0 | 3.32251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.03776E-05 | 0 |
K/R | None | None | 0.002 | N | 0.407 | 0.144 | 0.376039117802 | gnomAD-4.0.0 | 1.66562E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.52527E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7834 | likely_pathogenic | 0.8929 | pathogenic | -0.302 | Destabilizing | 0.25 | N | 0.585 | neutral | None | None | None | None | N |
K/C | 0.9204 | likely_pathogenic | 0.9521 | pathogenic | -0.31 | Destabilizing | 0.982 | D | 0.788 | deleterious | None | None | None | None | N |
K/D | 0.8764 | likely_pathogenic | 0.9362 | pathogenic | 0.137 | Stabilizing | 0.7 | D | 0.605 | neutral | None | None | None | None | N |
K/E | 0.4799 | ambiguous | 0.6984 | pathogenic | 0.206 | Stabilizing | 0.201 | N | 0.524 | neutral | D | 0.618322593 | None | None | N |
K/F | 0.973 | likely_pathogenic | 0.9889 | pathogenic | -0.102 | Destabilizing | 0.947 | D | 0.77 | deleterious | None | None | None | None | N |
K/G | 0.8298 | likely_pathogenic | 0.9067 | pathogenic | -0.619 | Destabilizing | 0.399 | N | 0.598 | neutral | None | None | None | None | N |
K/H | 0.5461 | ambiguous | 0.6339 | pathogenic | -0.899 | Destabilizing | 0.898 | D | 0.659 | prob.neutral | None | None | None | None | N |
K/I | 0.8735 | likely_pathogenic | 0.9531 | pathogenic | 0.493 | Stabilizing | 0.781 | D | 0.811 | deleterious | D | 0.597379448 | None | None | N |
K/L | 0.8203 | likely_pathogenic | 0.902 | pathogenic | 0.493 | Stabilizing | 0.399 | N | 0.598 | neutral | None | None | None | None | N |
K/M | 0.7113 | likely_pathogenic | 0.8441 | pathogenic | 0.328 | Stabilizing | 0.947 | D | 0.653 | prob.neutral | None | None | None | None | N |
K/N | 0.7067 | likely_pathogenic | 0.8423 | pathogenic | -0.071 | Destabilizing | 0.638 | D | 0.54 | neutral | D | 0.595714887 | None | None | N |
K/P | 0.9826 | likely_pathogenic | 0.9907 | pathogenic | 0.259 | Stabilizing | 0.826 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/Q | 0.2879 | likely_benign | 0.4025 | ambiguous | -0.193 | Destabilizing | 0.015 | N | 0.337 | neutral | N | 0.521446216 | None | None | N |
K/R | 0.112 | likely_benign | 0.1327 | benign | -0.362 | Destabilizing | 0.002 | N | 0.407 | neutral | N | 0.5206164 | None | None | N |
K/S | 0.7839 | likely_pathogenic | 0.8835 | pathogenic | -0.698 | Destabilizing | 0.25 | N | 0.531 | neutral | None | None | None | None | N |
K/T | 0.568 | likely_pathogenic | 0.7344 | pathogenic | -0.441 | Destabilizing | 0.638 | D | 0.609 | neutral | D | 0.578468739 | None | None | N |
K/V | 0.822 | likely_pathogenic | 0.917 | pathogenic | 0.259 | Stabilizing | 0.7 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/W | 0.9609 | likely_pathogenic | 0.9803 | pathogenic | 0.002 | Stabilizing | 0.982 | D | 0.767 | deleterious | None | None | None | None | N |
K/Y | 0.9194 | likely_pathogenic | 0.9601 | pathogenic | 0.286 | Stabilizing | 0.826 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.