Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13791 | 41596;41597;41598 | chr2:178636200;178636199;178636198 | chr2:179500927;179500926;179500925 |
N2AB | 12150 | 36673;36674;36675 | chr2:178636200;178636199;178636198 | chr2:179500927;179500926;179500925 |
N2A | 11223 | 33892;33893;33894 | chr2:178636200;178636199;178636198 | chr2:179500927;179500926;179500925 |
N2B | 4726 | 14401;14402;14403 | chr2:178636200;178636199;178636198 | chr2:179500927;179500926;179500925 |
Novex-1 | 4851 | 14776;14777;14778 | chr2:178636200;178636199;178636198 | chr2:179500927;179500926;179500925 |
Novex-2 | 4918 | 14977;14978;14979 | chr2:178636200;178636199;178636198 | chr2:179500927;179500926;179500925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2154230629 | None | 0.994 | N | 0.449 | 0.366 | 0.250039746154 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs2154230629 | None | 0.994 | N | 0.449 | 0.366 | 0.250039746154 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | N | None | 0 | 6.54965E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.242 | likely_benign | 0.2643 | benign | -0.333 | Destabilizing | 0.835 | D | 0.454 | neutral | N | 0.332871317 | None | None | N |
T/C | 0.806 | likely_pathogenic | 0.8347 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.504 | neutral | None | None | None | None | N |
T/D | 0.8319 | likely_pathogenic | 0.8718 | pathogenic | 0.107 | Stabilizing | 0.97 | D | 0.474 | neutral | None | None | None | None | N |
T/E | 0.6845 | likely_pathogenic | 0.752 | pathogenic | 0.106 | Stabilizing | 0.97 | D | 0.493 | neutral | None | None | None | None | N |
T/F | 0.6726 | likely_pathogenic | 0.7383 | pathogenic | -0.452 | Destabilizing | 0.999 | D | 0.673 | prob.neutral | None | None | None | None | N |
T/G | 0.7526 | likely_pathogenic | 0.768 | pathogenic | -0.568 | Destabilizing | 0.97 | D | 0.487 | neutral | None | None | None | None | N |
T/H | 0.6778 | likely_pathogenic | 0.7422 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.651 | prob.neutral | None | None | None | None | N |
T/I | 0.4616 | ambiguous | 0.5072 | ambiguous | 0.186 | Stabilizing | 0.994 | D | 0.449 | neutral | N | 0.325428053 | None | None | N |
T/K | 0.6484 | likely_pathogenic | 0.7357 | pathogenic | -0.544 | Destabilizing | 0.961 | D | 0.483 | neutral | N | 0.326108615 | None | None | N |
T/L | 0.3043 | likely_benign | 0.3389 | benign | 0.186 | Stabilizing | 0.985 | D | 0.425 | neutral | None | None | None | None | N |
T/M | 0.1783 | likely_benign | 0.2027 | benign | 0.043 | Stabilizing | 1.0 | D | 0.458 | neutral | None | None | None | None | N |
T/N | 0.3942 | ambiguous | 0.4403 | ambiguous | -0.522 | Destabilizing | 0.97 | D | 0.415 | neutral | None | None | None | None | N |
T/P | 0.5769 | likely_pathogenic | 0.6024 | pathogenic | 0.046 | Stabilizing | 0.994 | D | 0.451 | neutral | N | 0.427184355 | None | None | N |
T/Q | 0.5923 | likely_pathogenic | 0.6509 | pathogenic | -0.589 | Destabilizing | 0.996 | D | 0.463 | neutral | None | None | None | None | N |
T/R | 0.5858 | likely_pathogenic | 0.6818 | pathogenic | -0.37 | Destabilizing | 0.994 | D | 0.469 | neutral | N | 0.335328715 | None | None | N |
T/S | 0.2864 | likely_benign | 0.3146 | benign | -0.73 | Destabilizing | 0.287 | N | 0.207 | neutral | N | 0.35319199 | None | None | N |
T/V | 0.3273 | likely_benign | 0.345 | ambiguous | 0.046 | Stabilizing | 0.985 | D | 0.369 | neutral | None | None | None | None | N |
T/W | 0.9012 | likely_pathogenic | 0.9276 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | N |
T/Y | 0.7293 | likely_pathogenic | 0.7853 | pathogenic | -0.217 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.