Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13793 | 41602;41603;41604 | chr2:178636194;178636193;178636192 | chr2:179500921;179500920;179500919 |
N2AB | 12152 | 36679;36680;36681 | chr2:178636194;178636193;178636192 | chr2:179500921;179500920;179500919 |
N2A | 11225 | 33898;33899;33900 | chr2:178636194;178636193;178636192 | chr2:179500921;179500920;179500919 |
N2B | 4728 | 14407;14408;14409 | chr2:178636194;178636193;178636192 | chr2:179500921;179500920;179500919 |
Novex-1 | 4853 | 14782;14783;14784 | chr2:178636194;178636193;178636192 | chr2:179500921;179500920;179500919 |
Novex-2 | 4920 | 14983;14984;14985 | chr2:178636194;178636193;178636192 | chr2:179500921;179500920;179500919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.425 | N | 0.299 | 0.231 | 0.319686207203 | gnomAD-4.0.0 | 1.37447E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80516E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6307 | likely_pathogenic | 0.6941 | pathogenic | -0.828 | Destabilizing | 0.425 | N | 0.299 | neutral | N | 0.349016953 | None | None | N |
V/C | 0.933 | likely_pathogenic | 0.9437 | pathogenic | -0.764 | Destabilizing | 0.995 | D | 0.362 | neutral | None | None | None | None | N |
V/D | 0.9161 | likely_pathogenic | 0.9472 | pathogenic | -0.696 | Destabilizing | 0.975 | D | 0.597 | neutral | N | 0.346489142 | None | None | N |
V/E | 0.7652 | likely_pathogenic | 0.8304 | pathogenic | -0.778 | Destabilizing | 0.981 | D | 0.526 | neutral | None | None | None | None | N |
V/F | 0.4608 | ambiguous | 0.5261 | ambiguous | -0.797 | Destabilizing | 0.006 | N | 0.247 | neutral | N | 0.318222647 | None | None | N |
V/G | 0.7037 | likely_pathogenic | 0.7569 | pathogenic | -1.021 | Destabilizing | 0.917 | D | 0.555 | neutral | N | 0.318997306 | None | None | N |
V/H | 0.9353 | likely_pathogenic | 0.9564 | pathogenic | -0.502 | Destabilizing | 0.995 | D | 0.447 | neutral | None | None | None | None | N |
V/I | 0.1078 | likely_benign | 0.111 | benign | -0.448 | Destabilizing | 0.001 | N | 0.057 | neutral | N | 0.348183519 | None | None | N |
V/K | 0.8162 | likely_pathogenic | 0.8738 | pathogenic | -0.84 | Destabilizing | 0.944 | D | 0.52 | neutral | None | None | None | None | N |
V/L | 0.3811 | ambiguous | 0.4079 | ambiguous | -0.448 | Destabilizing | 0.001 | N | 0.025 | neutral | N | 0.34602325 | None | None | N |
V/M | 0.3645 | ambiguous | 0.4077 | ambiguous | -0.454 | Destabilizing | 0.893 | D | 0.383 | neutral | None | None | None | None | N |
V/N | 0.8162 | likely_pathogenic | 0.8686 | pathogenic | -0.616 | Destabilizing | 0.981 | D | 0.588 | neutral | None | None | None | None | N |
V/P | 0.7993 | likely_pathogenic | 0.8095 | pathogenic | -0.539 | Destabilizing | 0.981 | D | 0.539 | neutral | None | None | None | None | N |
V/Q | 0.7268 | likely_pathogenic | 0.7919 | pathogenic | -0.852 | Destabilizing | 0.981 | D | 0.498 | neutral | None | None | None | None | N |
V/R | 0.7536 | likely_pathogenic | 0.8242 | pathogenic | -0.247 | Destabilizing | 0.981 | D | 0.589 | neutral | None | None | None | None | N |
V/S | 0.726 | likely_pathogenic | 0.7927 | pathogenic | -0.996 | Destabilizing | 0.828 | D | 0.489 | neutral | None | None | None | None | N |
V/T | 0.5725 | likely_pathogenic | 0.6464 | pathogenic | -0.978 | Destabilizing | 0.704 | D | 0.304 | neutral | None | None | None | None | N |
V/W | 0.9638 | likely_pathogenic | 0.9734 | pathogenic | -0.897 | Destabilizing | 0.995 | D | 0.452 | neutral | None | None | None | None | N |
V/Y | 0.8731 | likely_pathogenic | 0.912 | pathogenic | -0.625 | Destabilizing | 0.543 | D | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.