Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13809 | 41650;41651;41652 | chr2:178636146;178636145;178636144 | chr2:179500873;179500872;179500871 |
N2AB | 12168 | 36727;36728;36729 | chr2:178636146;178636145;178636144 | chr2:179500873;179500872;179500871 |
N2A | 11241 | 33946;33947;33948 | chr2:178636146;178636145;178636144 | chr2:179500873;179500872;179500871 |
N2B | 4744 | 14455;14456;14457 | chr2:178636146;178636145;178636144 | chr2:179500873;179500872;179500871 |
Novex-1 | 4869 | 14830;14831;14832 | chr2:178636146;178636145;178636144 | chr2:179500873;179500872;179500871 |
Novex-2 | 4936 | 15031;15032;15033 | chr2:178636146;178636145;178636144 | chr2:179500873;179500872;179500871 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs761516226 | 0.001 | 0.059 | N | 0.271 | 0.083 | 0.101711395817 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/N | rs761516226 | 0.001 | 0.059 | N | 0.271 | 0.083 | 0.101711395817 | gnomAD-4.0.0 | 3.18579E-06 | None | None | None | None | I | None | 0 | 2.2877E-05 | None | 0 | 0 | None | 0 | 0 | 2.86059E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3422 | ambiguous | 0.3405 | ambiguous | -0.079 | Destabilizing | 0.811 | D | 0.584 | neutral | N | 0.332452957 | None | None | I |
D/C | 0.9109 | likely_pathogenic | 0.9008 | pathogenic | -0.024 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | I |
D/E | 0.3229 | likely_benign | 0.3141 | benign | -0.351 | Destabilizing | 0.226 | N | 0.225 | neutral | N | 0.343702297 | None | None | I |
D/F | 0.8739 | likely_pathogenic | 0.8707 | pathogenic | 0.081 | Stabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | I |
D/G | 0.3787 | ambiguous | 0.357 | ambiguous | -0.293 | Destabilizing | 0.811 | D | 0.593 | neutral | N | 0.361285048 | None | None | I |
D/H | 0.6271 | likely_pathogenic | 0.5943 | pathogenic | 0.312 | Stabilizing | 0.996 | D | 0.682 | prob.neutral | N | 0.331061515 | None | None | I |
D/I | 0.7149 | likely_pathogenic | 0.7206 | pathogenic | 0.435 | Stabilizing | 0.988 | D | 0.821 | deleterious | None | None | None | None | I |
D/K | 0.7135 | likely_pathogenic | 0.6891 | pathogenic | 0.424 | Stabilizing | 0.919 | D | 0.629 | neutral | None | None | None | None | I |
D/L | 0.6971 | likely_pathogenic | 0.6976 | pathogenic | 0.435 | Stabilizing | 0.976 | D | 0.765 | deleterious | None | None | None | None | I |
D/M | 0.8844 | likely_pathogenic | 0.8842 | pathogenic | 0.377 | Stabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | I |
D/N | 0.1861 | likely_benign | 0.1744 | benign | 0.008 | Stabilizing | 0.059 | N | 0.271 | neutral | N | 0.338468588 | None | None | I |
D/P | 0.7355 | likely_pathogenic | 0.753 | pathogenic | 0.287 | Stabilizing | 0.988 | D | 0.662 | prob.neutral | None | None | None | None | I |
D/Q | 0.6892 | likely_pathogenic | 0.6625 | pathogenic | 0.055 | Stabilizing | 0.976 | D | 0.521 | neutral | None | None | None | None | I |
D/R | 0.7661 | likely_pathogenic | 0.7429 | pathogenic | 0.643 | Stabilizing | 0.976 | D | 0.802 | deleterious | None | None | None | None | I |
D/S | 0.2783 | likely_benign | 0.2626 | benign | -0.072 | Destabilizing | 0.261 | N | 0.287 | neutral | None | None | None | None | I |
D/T | 0.507 | ambiguous | 0.4998 | ambiguous | 0.098 | Stabilizing | 0.851 | D | 0.631 | neutral | None | None | None | None | I |
D/V | 0.4825 | ambiguous | 0.48 | ambiguous | 0.287 | Stabilizing | 0.968 | D | 0.779 | deleterious | N | 0.329968144 | None | None | I |
D/W | 0.9776 | likely_pathogenic | 0.9779 | pathogenic | 0.211 | Stabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | I |
D/Y | 0.523 | ambiguous | 0.4944 | ambiguous | 0.331 | Stabilizing | 0.995 | D | 0.786 | deleterious | N | 0.316589176 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.