Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13821 | 41686;41687;41688 | chr2:178636110;178636109;178636108 | chr2:179500837;179500836;179500835 |
N2AB | 12180 | 36763;36764;36765 | chr2:178636110;178636109;178636108 | chr2:179500837;179500836;179500835 |
N2A | 11253 | 33982;33983;33984 | chr2:178636110;178636109;178636108 | chr2:179500837;179500836;179500835 |
N2B | 4756 | 14491;14492;14493 | chr2:178636110;178636109;178636108 | chr2:179500837;179500836;179500835 |
Novex-1 | 4881 | 14866;14867;14868 | chr2:178636110;178636109;178636108 | chr2:179500837;179500836;179500835 |
Novex-2 | 4948 | 15067;15068;15069 | chr2:178636110;178636109;178636108 | chr2:179500837;179500836;179500835 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs749586891 | -0.005 | 0.01 | N | 0.166 | 0.136 | 0.117506650769 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs749586891 | -0.441 | 0.065 | N | 0.217 | 0.073 | 0.0716867268079 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs749586891 | -0.441 | 0.065 | N | 0.217 | 0.073 | 0.0716867268079 | gnomAD-4.0.0 | 1.5925E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.288 | likely_benign | 0.3047 | benign | -0.384 | Destabilizing | 0.006 | N | 0.262 | neutral | N | 0.341379391 | None | None | N |
E/C | 0.9533 | likely_pathogenic | 0.9525 | pathogenic | -0.371 | Destabilizing | 0.995 | D | 0.261 | neutral | None | None | None | None | N |
E/D | 0.2688 | likely_benign | 0.289 | benign | -0.659 | Destabilizing | 0.006 | N | 0.163 | neutral | N | 0.347271954 | None | None | N |
E/F | 0.9525 | likely_pathogenic | 0.9564 | pathogenic | 0.129 | Stabilizing | 0.944 | D | 0.349 | neutral | None | None | None | None | N |
E/G | 0.2853 | likely_benign | 0.2893 | benign | -0.671 | Destabilizing | 0.27 | N | 0.384 | neutral | N | 0.344335029 | None | None | N |
E/H | 0.8165 | likely_pathogenic | 0.8191 | pathogenic | 0.309 | Stabilizing | 0.944 | D | 0.329 | neutral | None | None | None | None | N |
E/I | 0.7485 | likely_pathogenic | 0.7726 | pathogenic | 0.368 | Stabilizing | 0.069 | N | 0.315 | neutral | None | None | None | None | N |
E/K | 0.4154 | ambiguous | 0.4119 | ambiguous | -0.015 | Destabilizing | 0.01 | N | 0.166 | neutral | N | 0.350368244 | None | None | N |
E/L | 0.7204 | likely_pathogenic | 0.7527 | pathogenic | 0.368 | Stabilizing | 0.329 | N | 0.349 | neutral | None | None | None | None | N |
E/M | 0.7636 | likely_pathogenic | 0.7788 | pathogenic | 0.325 | Stabilizing | 0.944 | D | 0.293 | neutral | None | None | None | None | N |
E/N | 0.5178 | ambiguous | 0.5494 | ambiguous | -0.613 | Destabilizing | 0.543 | D | 0.209 | neutral | None | None | None | None | N |
E/P | 0.6093 | likely_pathogenic | 0.6147 | pathogenic | 0.138 | Stabilizing | 0.828 | D | 0.383 | neutral | None | None | None | None | N |
E/Q | 0.2724 | likely_benign | 0.2724 | benign | -0.488 | Destabilizing | 0.065 | N | 0.217 | neutral | N | 0.343922662 | None | None | N |
E/R | 0.6066 | likely_pathogenic | 0.5805 | pathogenic | 0.356 | Stabilizing | 0.543 | D | 0.213 | neutral | None | None | None | None | N |
E/S | 0.3637 | ambiguous | 0.3765 | ambiguous | -0.763 | Destabilizing | 0.329 | N | 0.33 | neutral | None | None | None | None | N |
E/T | 0.471 | ambiguous | 0.5113 | ambiguous | -0.52 | Destabilizing | 0.031 | N | 0.259 | neutral | None | None | None | None | N |
E/V | 0.4972 | ambiguous | 0.5275 | ambiguous | 0.138 | Stabilizing | 0.27 | N | 0.333 | neutral | N | 0.356963791 | None | None | N |
E/W | 0.9789 | likely_pathogenic | 0.9778 | pathogenic | 0.349 | Stabilizing | 0.995 | D | 0.311 | neutral | None | None | None | None | N |
E/Y | 0.9064 | likely_pathogenic | 0.9101 | pathogenic | 0.379 | Stabilizing | 0.981 | D | 0.34 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.