Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13826 | 41701;41702;41703 | chr2:178636095;178636094;178636093 | chr2:179500822;179500821;179500820 |
N2AB | 12185 | 36778;36779;36780 | chr2:178636095;178636094;178636093 | chr2:179500822;179500821;179500820 |
N2A | 11258 | 33997;33998;33999 | chr2:178636095;178636094;178636093 | chr2:179500822;179500821;179500820 |
N2B | 4761 | 14506;14507;14508 | chr2:178636095;178636094;178636093 | chr2:179500822;179500821;179500820 |
Novex-1 | 4886 | 14881;14882;14883 | chr2:178636095;178636094;178636093 | chr2:179500822;179500821;179500820 |
Novex-2 | 4953 | 15082;15083;15084 | chr2:178636095;178636094;178636093 | chr2:179500822;179500821;179500820 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs1252440805 | None | 0.772 | N | 0.741 | 0.138 | 0.389439708392 | gnomAD-4.0.0 | 6.84415E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9964E-07 | 0 | 0 |
I/T | rs1252440805 | -3.055 | 0.003 | N | 0.427 | 0.149 | 0.354396617058 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 9.29E-05 | 0 | 0 |
I/V | None | None | 0.001 | N | 0.171 | 0.082 | 0.170165803431 | gnomAD-4.0.0 | 1.59242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86005E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5809 | likely_pathogenic | 0.6923 | pathogenic | -2.622 | Highly Destabilizing | 0.209 | N | 0.634 | neutral | None | None | None | None | N |
I/C | 0.8393 | likely_pathogenic | 0.8568 | pathogenic | -1.923 | Destabilizing | 0.965 | D | 0.578 | neutral | None | None | None | None | N |
I/D | 0.9232 | likely_pathogenic | 0.95 | pathogenic | -2.98 | Highly Destabilizing | 0.818 | D | 0.735 | deleterious | None | None | None | None | N |
I/E | 0.8346 | likely_pathogenic | 0.8837 | pathogenic | -2.844 | Highly Destabilizing | 0.561 | D | 0.7 | prob.delet. | None | None | None | None | N |
I/F | 0.2199 | likely_benign | 0.2455 | benign | -1.63 | Destabilizing | 0.003 | N | 0.353 | neutral | N | 0.346905246 | None | None | N |
I/G | 0.8916 | likely_pathogenic | 0.9317 | pathogenic | -3.087 | Highly Destabilizing | 0.561 | D | 0.669 | prob.neutral | None | None | None | None | N |
I/H | 0.7983 | likely_pathogenic | 0.8248 | pathogenic | -2.46 | Highly Destabilizing | 0.818 | D | 0.691 | prob.delet. | None | None | None | None | N |
I/K | 0.7832 | likely_pathogenic | 0.8261 | pathogenic | -2.185 | Highly Destabilizing | 0.561 | D | 0.701 | prob.delet. | None | None | None | None | N |
I/L | 0.1987 | likely_benign | 0.2289 | benign | -1.31 | Destabilizing | None | N | 0.175 | neutral | N | 0.339451123 | None | None | N |
I/M | 0.1522 | likely_benign | 0.1632 | benign | -1.172 | Destabilizing | 0.772 | D | 0.531 | neutral | N | 0.32862299 | None | None | N |
I/N | 0.6295 | likely_pathogenic | 0.6902 | pathogenic | -2.285 | Highly Destabilizing | 0.772 | D | 0.741 | deleterious | N | 0.309993656 | None | None | N |
I/P | 0.9436 | likely_pathogenic | 0.9647 | pathogenic | -1.726 | Destabilizing | 0.901 | D | 0.726 | deleterious | None | None | None | None | N |
I/Q | 0.7944 | likely_pathogenic | 0.8305 | pathogenic | -2.301 | Highly Destabilizing | 0.901 | D | 0.714 | prob.delet. | None | None | None | None | N |
I/R | 0.6808 | likely_pathogenic | 0.7395 | pathogenic | -1.659 | Destabilizing | 0.818 | D | 0.725 | deleterious | None | None | None | None | N |
I/S | 0.6234 | likely_pathogenic | 0.7074 | pathogenic | -2.906 | Highly Destabilizing | 0.326 | N | 0.657 | prob.neutral | N | 0.347693417 | None | None | N |
I/T | 0.3334 | likely_benign | 0.4379 | ambiguous | -2.649 | Highly Destabilizing | 0.003 | N | 0.427 | neutral | N | 0.308566076 | None | None | N |
I/V | 0.091 | likely_benign | 0.1251 | benign | -1.726 | Destabilizing | 0.001 | N | 0.171 | neutral | N | 0.346810489 | None | None | N |
I/W | 0.8441 | likely_pathogenic | 0.8533 | pathogenic | -1.961 | Destabilizing | 0.972 | D | 0.691 | prob.delet. | None | None | None | None | N |
I/Y | 0.64 | likely_pathogenic | 0.6247 | pathogenic | -1.75 | Destabilizing | 0.004 | N | 0.493 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.