Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13827 | 41704;41705;41706 | chr2:178636092;178636091;178636090 | chr2:179500819;179500818;179500817 |
N2AB | 12186 | 36781;36782;36783 | chr2:178636092;178636091;178636090 | chr2:179500819;179500818;179500817 |
N2A | 11259 | 34000;34001;34002 | chr2:178636092;178636091;178636090 | chr2:179500819;179500818;179500817 |
N2B | 4762 | 14509;14510;14511 | chr2:178636092;178636091;178636090 | chr2:179500819;179500818;179500817 |
Novex-1 | 4887 | 14884;14885;14886 | chr2:178636092;178636091;178636090 | chr2:179500819;179500818;179500817 |
Novex-2 | 4954 | 15085;15086;15087 | chr2:178636092;178636091;178636090 | chr2:179500819;179500818;179500817 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.27 | N | 0.335 | 0.18 | 0.296329037015 | gnomAD-4.0.0 | 4.79082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29744E-06 | 0 | 0 |
V/G | None | None | 0.27 | N | 0.381 | 0.185 | 0.369682402691 | gnomAD-4.0.0 | 6.84403E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99635E-07 | 0 | 0 |
V/L | None | None | 0.139 | N | 0.197 | 0.043 | 0.24896430686 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3521 | ambiguous | 0.4105 | ambiguous | -1.237 | Destabilizing | 0.001 | N | 0.066 | neutral | N | 0.341613636 | None | None | N |
V/C | 0.8589 | likely_pathogenic | 0.8763 | pathogenic | -1.029 | Destabilizing | 0.981 | D | 0.382 | neutral | None | None | None | None | N |
V/D | 0.6875 | likely_pathogenic | 0.7785 | pathogenic | -0.835 | Destabilizing | 0.704 | D | 0.487 | neutral | None | None | None | None | N |
V/E | 0.4883 | ambiguous | 0.5762 | pathogenic | -0.874 | Destabilizing | 0.27 | N | 0.335 | neutral | N | 0.351543553 | None | None | N |
V/F | 0.2104 | likely_benign | 0.2824 | benign | -1.079 | Destabilizing | 0.944 | D | 0.527 | neutral | None | None | None | None | N |
V/G | 0.4962 | ambiguous | 0.5891 | pathogenic | -1.503 | Destabilizing | 0.27 | N | 0.381 | neutral | N | 0.350087053 | None | None | N |
V/H | 0.7362 | likely_pathogenic | 0.7848 | pathogenic | -0.995 | Destabilizing | 0.944 | D | 0.517 | neutral | None | None | None | None | N |
V/I | 0.0859 | likely_benign | 0.0887 | benign | -0.631 | Destabilizing | 0.495 | N | 0.273 | neutral | None | None | None | None | N |
V/K | 0.5725 | likely_pathogenic | 0.6648 | pathogenic | -0.947 | Destabilizing | 0.329 | N | 0.349 | neutral | None | None | None | None | N |
V/L | 0.2547 | likely_benign | 0.3169 | benign | -0.631 | Destabilizing | 0.139 | N | 0.197 | neutral | N | 0.349375178 | None | None | N |
V/M | 0.1792 | likely_benign | 0.2283 | benign | -0.545 | Destabilizing | 0.975 | D | 0.382 | neutral | N | 0.347400505 | None | None | N |
V/N | 0.4712 | ambiguous | 0.5366 | ambiguous | -0.724 | Destabilizing | 0.704 | D | 0.525 | neutral | None | None | None | None | N |
V/P | 0.9345 | likely_pathogenic | 0.9628 | pathogenic | -0.797 | Destabilizing | 0.828 | D | 0.499 | neutral | None | None | None | None | N |
V/Q | 0.4717 | ambiguous | 0.5227 | ambiguous | -0.941 | Destabilizing | 0.037 | N | 0.225 | neutral | None | None | None | None | N |
V/R | 0.5135 | ambiguous | 0.6228 | pathogenic | -0.434 | Destabilizing | 0.704 | D | 0.528 | neutral | None | None | None | None | N |
V/S | 0.3558 | ambiguous | 0.4138 | ambiguous | -1.266 | Destabilizing | 0.037 | N | 0.239 | neutral | None | None | None | None | N |
V/T | 0.3033 | likely_benign | 0.3377 | benign | -1.193 | Destabilizing | 0.013 | N | 0.104 | neutral | None | None | None | None | N |
V/W | 0.9134 | likely_pathogenic | 0.949 | pathogenic | -1.178 | Destabilizing | 0.995 | D | 0.545 | neutral | None | None | None | None | N |
V/Y | 0.6825 | likely_pathogenic | 0.7646 | pathogenic | -0.884 | Destabilizing | 0.981 | D | 0.527 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.