Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13836 | 41731;41732;41733 | chr2:178636065;178636064;178636063 | chr2:179500792;179500791;179500790 |
N2AB | 12195 | 36808;36809;36810 | chr2:178636065;178636064;178636063 | chr2:179500792;179500791;179500790 |
N2A | 11268 | 34027;34028;34029 | chr2:178636065;178636064;178636063 | chr2:179500792;179500791;179500790 |
N2B | 4771 | 14536;14537;14538 | chr2:178636065;178636064;178636063 | chr2:179500792;179500791;179500790 |
Novex-1 | 4896 | 14911;14912;14913 | chr2:178636065;178636064;178636063 | chr2:179500792;179500791;179500790 |
Novex-2 | 4963 | 15112;15113;15114 | chr2:178636065;178636064;178636063 | chr2:179500792;179500791;179500790 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1326857970 | -1.74 | 0.007 | N | 0.302 | 0.042 | 0.0986583533028 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
A/S | rs1326857970 | -1.74 | 0.007 | N | 0.302 | 0.042 | 0.0986583533028 | gnomAD-4.0.0 | 1.59232E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6792 | likely_pathogenic | 0.649 | pathogenic | -0.92 | Destabilizing | 0.992 | D | 0.671 | prob.neutral | None | None | None | None | N |
A/D | 0.9239 | likely_pathogenic | 0.9458 | pathogenic | -1.71 | Destabilizing | 0.549 | D | 0.712 | prob.delet. | N | 0.344593131 | None | None | N |
A/E | 0.8466 | likely_pathogenic | 0.8833 | pathogenic | -1.592 | Destabilizing | 0.617 | D | 0.723 | deleterious | None | None | None | None | N |
A/F | 0.6298 | likely_pathogenic | 0.6658 | pathogenic | -0.758 | Destabilizing | 0.739 | D | 0.729 | deleterious | None | None | None | None | N |
A/G | 0.3862 | ambiguous | 0.4218 | ambiguous | -1.317 | Destabilizing | 0.201 | N | 0.685 | prob.delet. | N | 0.338988895 | None | None | N |
A/H | 0.8721 | likely_pathogenic | 0.8817 | pathogenic | -1.803 | Destabilizing | 0.92 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/I | 0.5776 | likely_pathogenic | 0.5935 | pathogenic | 0.181 | Stabilizing | 0.217 | N | 0.727 | deleterious | None | None | None | None | N |
A/K | 0.9386 | likely_pathogenic | 0.9586 | pathogenic | -1.091 | Destabilizing | 0.617 | D | 0.729 | deleterious | None | None | None | None | N |
A/L | 0.4868 | ambiguous | 0.481 | ambiguous | 0.181 | Stabilizing | 0.25 | N | 0.713 | prob.delet. | None | None | None | None | N |
A/M | 0.5017 | ambiguous | 0.4942 | ambiguous | 0.074 | Stabilizing | 0.85 | D | 0.689 | prob.delet. | None | None | None | None | N |
A/N | 0.7411 | likely_pathogenic | 0.7674 | pathogenic | -1.117 | Destabilizing | 0.85 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/P | 0.9589 | likely_pathogenic | 0.9747 | pathogenic | -0.132 | Destabilizing | 0.896 | D | 0.738 | deleterious | N | 0.312275965 | None | None | N |
A/Q | 0.7964 | likely_pathogenic | 0.8143 | pathogenic | -1.039 | Destabilizing | 0.92 | D | 0.765 | deleterious | None | None | None | None | N |
A/R | 0.8648 | likely_pathogenic | 0.9019 | pathogenic | -1.098 | Destabilizing | 0.85 | D | 0.747 | deleterious | None | None | None | None | N |
A/S | 0.1733 | likely_benign | 0.1695 | benign | -1.536 | Destabilizing | 0.007 | N | 0.302 | neutral | N | 0.32753983 | None | None | N |
A/T | 0.227 | likely_benign | 0.2376 | benign | -1.293 | Destabilizing | 0.002 | N | 0.291 | neutral | N | 0.338672212 | None | None | N |
A/V | 0.3069 | likely_benign | 0.316 | benign | -0.132 | Destabilizing | 0.004 | N | 0.463 | neutral | N | 0.346677199 | None | None | N |
A/W | 0.9448 | likely_pathogenic | 0.9539 | pathogenic | -1.427 | Destabilizing | 0.992 | D | 0.767 | deleterious | None | None | None | None | N |
A/Y | 0.7822 | likely_pathogenic | 0.8087 | pathogenic | -0.864 | Destabilizing | 0.048 | N | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.