Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13876 | 41851;41852;41853 | chr2:178635698;178635697;178635696 | chr2:179500425;179500424;179500423 |
N2AB | 12235 | 36928;36929;36930 | chr2:178635698;178635697;178635696 | chr2:179500425;179500424;179500423 |
N2A | 11308 | 34147;34148;34149 | chr2:178635698;178635697;178635696 | chr2:179500425;179500424;179500423 |
N2B | 4811 | 14656;14657;14658 | chr2:178635698;178635697;178635696 | chr2:179500425;179500424;179500423 |
Novex-1 | 4936 | 15031;15032;15033 | chr2:178635698;178635697;178635696 | chr2:179500425;179500424;179500423 |
Novex-2 | 5003 | 15232;15233;15234 | chr2:178635698;178635697;178635696 | chr2:179500425;179500424;179500423 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.997 | N | 0.697 | 0.144 | 0.422524665647 | gnomAD-4.0.0 | 1.62411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9098E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8935 | likely_pathogenic | 0.9247 | pathogenic | -2.049 | Highly Destabilizing | 0.991 | D | 0.608 | neutral | None | None | None | None | N |
L/C | 0.9284 | likely_pathogenic | 0.9482 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/D | 0.9965 | likely_pathogenic | 0.9977 | pathogenic | -1.795 | Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
L/E | 0.9754 | likely_pathogenic | 0.9842 | pathogenic | -1.697 | Destabilizing | 0.999 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.7159 | likely_pathogenic | 0.7923 | pathogenic | -1.312 | Destabilizing | 0.283 | N | 0.443 | neutral | None | None | None | None | N |
L/G | 0.9827 | likely_pathogenic | 0.9884 | pathogenic | -2.439 | Highly Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
L/H | 0.9604 | likely_pathogenic | 0.9744 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/I | 0.2533 | likely_benign | 0.306 | benign | -0.988 | Destabilizing | 0.422 | N | 0.243 | neutral | None | None | None | None | N |
L/K | 0.9594 | likely_pathogenic | 0.9727 | pathogenic | -1.479 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
L/M | 0.3784 | ambiguous | 0.4334 | ambiguous | -0.863 | Destabilizing | 0.997 | D | 0.697 | prob.delet. | N | 0.505204106 | None | None | N |
L/N | 0.9798 | likely_pathogenic | 0.9863 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
L/P | 0.9791 | likely_pathogenic | 0.9813 | pathogenic | -1.317 | Destabilizing | 0.999 | D | 0.867 | deleterious | N | 0.506796605 | None | None | N |
L/Q | 0.9326 | likely_pathogenic | 0.9578 | pathogenic | -1.525 | Destabilizing | 0.999 | D | 0.814 | deleterious | N | 0.506796605 | None | None | N |
L/R | 0.9343 | likely_pathogenic | 0.9579 | pathogenic | -0.968 | Destabilizing | 0.999 | D | 0.825 | deleterious | N | 0.505411417 | None | None | N |
L/S | 0.9824 | likely_pathogenic | 0.9896 | pathogenic | -2.062 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
L/T | 0.9193 | likely_pathogenic | 0.9461 | pathogenic | -1.833 | Destabilizing | 0.997 | D | 0.728 | deleterious | None | None | None | None | N |
L/V | 0.3359 | likely_benign | 0.3995 | ambiguous | -1.317 | Destabilizing | 0.894 | D | 0.555 | neutral | N | 0.444613255 | None | None | N |
L/W | 0.9193 | likely_pathogenic | 0.9457 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/Y | 0.9478 | likely_pathogenic | 0.9645 | pathogenic | -1.205 | Destabilizing | 0.99 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.