Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13878 | 41857;41858;41859 | chr2:178635692;178635691;178635690 | chr2:179500419;179500418;179500417 |
N2AB | 12237 | 36934;36935;36936 | chr2:178635692;178635691;178635690 | chr2:179500419;179500418;179500417 |
N2A | 11310 | 34153;34154;34155 | chr2:178635692;178635691;178635690 | chr2:179500419;179500418;179500417 |
N2B | 4813 | 14662;14663;14664 | chr2:178635692;178635691;178635690 | chr2:179500419;179500418;179500417 |
Novex-1 | 4938 | 15037;15038;15039 | chr2:178635692;178635691;178635690 | chr2:179500419;179500418;179500417 |
Novex-2 | 5005 | 15238;15239;15240 | chr2:178635692;178635691;178635690 | chr2:179500419;179500418;179500417 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.999 | D | 0.66 | 0.232 | 0.17258766438 | gnomAD-4.0.0 | 6.89888E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04254E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8016 | likely_pathogenic | 0.92 | pathogenic | 0.008 | Stabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
K/C | 0.9058 | likely_pathogenic | 0.9552 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/D | 0.9343 | likely_pathogenic | 0.9725 | pathogenic | 0.126 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
K/E | 0.6221 | likely_pathogenic | 0.8281 | pathogenic | 0.156 | Stabilizing | 0.991 | D | 0.536 | neutral | D | 0.548257807 | None | None | N |
K/F | 0.9532 | likely_pathogenic | 0.9772 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/G | 0.8673 | likely_pathogenic | 0.9403 | pathogenic | -0.221 | Destabilizing | 0.999 | D | 0.67 | prob.neutral | None | None | None | None | N |
K/H | 0.4875 | ambiguous | 0.6552 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
K/I | 0.8206 | likely_pathogenic | 0.8919 | pathogenic | 0.542 | Stabilizing | 1.0 | D | 0.831 | deleterious | D | 0.546466703 | None | None | N |
K/L | 0.7498 | likely_pathogenic | 0.8516 | pathogenic | 0.542 | Stabilizing | 0.999 | D | 0.67 | prob.neutral | None | None | None | None | N |
K/M | 0.6612 | likely_pathogenic | 0.7972 | pathogenic | 0.167 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/N | 0.8079 | likely_pathogenic | 0.9021 | pathogenic | 0.137 | Stabilizing | 0.999 | D | 0.66 | prob.neutral | D | 0.553537344 | None | None | N |
K/P | 0.9782 | likely_pathogenic | 0.9897 | pathogenic | 0.393 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/Q | 0.3269 | likely_benign | 0.5211 | ambiguous | 0.017 | Stabilizing | 0.997 | D | 0.663 | prob.neutral | D | 0.544375937 | None | None | N |
K/R | 0.1211 | likely_benign | 0.1598 | benign | -0.088 | Destabilizing | 0.451 | N | 0.333 | neutral | N | 0.508182075 | None | None | N |
K/S | 0.8221 | likely_pathogenic | 0.9184 | pathogenic | -0.354 | Destabilizing | 0.997 | D | 0.618 | neutral | None | None | None | None | N |
K/T | 0.5775 | likely_pathogenic | 0.7609 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | D | 0.544560643 | None | None | N |
K/V | 0.7689 | likely_pathogenic | 0.8639 | pathogenic | 0.393 | Stabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
K/W | 0.9443 | likely_pathogenic | 0.9714 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/Y | 0.8873 | likely_pathogenic | 0.9395 | pathogenic | 0.26 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.