Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13910 | 41953;41954;41955 | chr2:178635596;178635595;178635594 | chr2:179500323;179500322;179500321 |
N2AB | 12269 | 37030;37031;37032 | chr2:178635596;178635595;178635594 | chr2:179500323;179500322;179500321 |
N2A | 11342 | 34249;34250;34251 | chr2:178635596;178635595;178635594 | chr2:179500323;179500322;179500321 |
N2B | 4845 | 14758;14759;14760 | chr2:178635596;178635595;178635594 | chr2:179500323;179500322;179500321 |
Novex-1 | 4970 | 15133;15134;15135 | chr2:178635596;178635595;178635594 | chr2:179500323;179500322;179500321 |
Novex-2 | 5037 | 15334;15335;15336 | chr2:178635596;178635595;178635594 | chr2:179500323;179500322;179500321 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1469876306 | None | 0.985 | N | 0.345 | 0.23 | 0.394079506076 | gnomAD-4.0.0 | 1.64326E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5541 | ambiguous | 0.4863 | ambiguous | -0.435 | Destabilizing | 0.312 | N | 0.342 | neutral | None | None | None | None | N |
Y/C | 0.3279 | likely_benign | 0.2642 | benign | -0.008 | Destabilizing | 0.985 | D | 0.345 | neutral | N | 0.450066054 | None | None | N |
Y/D | 0.2636 | likely_benign | 0.1928 | benign | 0.867 | Stabilizing | None | N | 0.141 | neutral | N | 0.407438814 | None | None | N |
Y/E | 0.616 | likely_pathogenic | 0.5386 | ambiguous | 0.844 | Stabilizing | 0.002 | N | 0.131 | neutral | None | None | None | None | N |
Y/F | 0.1467 | likely_benign | 0.1404 | benign | -0.272 | Destabilizing | 0.837 | D | 0.392 | neutral | N | 0.450066054 | None | None | N |
Y/G | 0.4354 | ambiguous | 0.3781 | ambiguous | -0.576 | Destabilizing | 0.312 | N | 0.355 | neutral | None | None | None | None | N |
Y/H | 0.4648 | ambiguous | 0.3605 | ambiguous | 0.344 | Stabilizing | 0.947 | D | 0.354 | neutral | N | 0.449075702 | None | None | N |
Y/I | 0.67 | likely_pathogenic | 0.5961 | pathogenic | -0.104 | Destabilizing | 0.691 | D | 0.425 | neutral | None | None | None | None | N |
Y/K | 0.8002 | likely_pathogenic | 0.7078 | pathogenic | 0.201 | Stabilizing | 0.312 | N | 0.385 | neutral | None | None | None | None | N |
Y/L | 0.5672 | likely_pathogenic | 0.5272 | ambiguous | -0.104 | Destabilizing | 0.479 | N | 0.37 | neutral | None | None | None | None | N |
Y/M | 0.665 | likely_pathogenic | 0.6187 | pathogenic | -0.175 | Destabilizing | 0.96 | D | 0.343 | neutral | None | None | None | None | N |
Y/N | 0.1893 | likely_benign | 0.1434 | benign | -0.082 | Destabilizing | 0.146 | N | 0.359 | neutral | N | 0.434057231 | None | None | N |
Y/P | 0.7095 | likely_pathogenic | 0.642 | pathogenic | -0.197 | Destabilizing | 0.691 | D | 0.504 | neutral | None | None | None | None | N |
Y/Q | 0.7164 | likely_pathogenic | 0.6352 | pathogenic | 0.017 | Stabilizing | 0.524 | D | 0.397 | neutral | None | None | None | None | N |
Y/R | 0.6983 | likely_pathogenic | 0.6084 | pathogenic | 0.346 | Stabilizing | 0.524 | D | 0.469 | neutral | None | None | None | None | N |
Y/S | 0.2519 | likely_benign | 0.2043 | benign | -0.438 | Destabilizing | 0.255 | N | 0.334 | neutral | N | 0.444000561 | None | None | N |
Y/T | 0.5014 | ambiguous | 0.4281 | ambiguous | -0.376 | Destabilizing | 0.312 | N | 0.38 | neutral | None | None | None | None | N |
Y/V | 0.5519 | ambiguous | 0.4907 | ambiguous | -0.197 | Destabilizing | 0.691 | D | 0.382 | neutral | None | None | None | None | N |
Y/W | 0.4951 | ambiguous | 0.459 | ambiguous | -0.481 | Destabilizing | 0.989 | D | 0.377 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.