Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13921 | 41986;41987;41988 | chr2:178635563;178635562;178635561 | chr2:179500290;179500289;179500288 |
N2AB | 12280 | 37063;37064;37065 | chr2:178635563;178635562;178635561 | chr2:179500290;179500289;179500288 |
N2A | 11353 | 34282;34283;34284 | chr2:178635563;178635562;178635561 | chr2:179500290;179500289;179500288 |
N2B | 4856 | 14791;14792;14793 | chr2:178635563;178635562;178635561 | chr2:179500290;179500289;179500288 |
Novex-1 | 4981 | 15166;15167;15168 | chr2:178635563;178635562;178635561 | chr2:179500290;179500289;179500288 |
Novex-2 | 5048 | 15367;15368;15369 | chr2:178635563;178635562;178635561 | chr2:179500290;179500289;179500288 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.817 | N | 0.474 | 0.152 | 0.101711395817 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | None | None | 0.126 | N | 0.398 | 0.189 | 0.186928172975 | gnomAD-4.0.0 | 6.93129E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08001E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2779 | likely_benign | 0.3176 | benign | -0.877 | Destabilizing | 0.817 | D | 0.474 | neutral | N | 0.470557234 | None | None | N |
T/C | 0.6676 | likely_pathogenic | 0.6832 | pathogenic | -0.792 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
T/D | 0.9202 | likely_pathogenic | 0.9028 | pathogenic | -1.646 | Destabilizing | 0.997 | D | 0.706 | prob.delet. | None | None | None | None | N |
T/E | 0.8014 | likely_pathogenic | 0.7804 | pathogenic | -1.476 | Destabilizing | 0.989 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/F | 0.4651 | ambiguous | 0.5696 | pathogenic | -0.439 | Destabilizing | 0.877 | D | 0.685 | prob.delet. | None | None | None | None | N |
T/G | 0.7057 | likely_pathogenic | 0.7112 | pathogenic | -1.283 | Destabilizing | 0.967 | D | 0.669 | prob.neutral | None | None | None | None | N |
T/H | 0.6725 | likely_pathogenic | 0.7177 | pathogenic | -1.625 | Destabilizing | 0.99 | D | 0.642 | neutral | None | None | None | None | N |
T/I | 0.3099 | likely_benign | 0.3873 | ambiguous | 0.172 | Stabilizing | 0.126 | N | 0.398 | neutral | N | 0.441913628 | None | None | N |
T/K | 0.8001 | likely_pathogenic | 0.7907 | pathogenic | -0.947 | Destabilizing | 0.967 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/L | 0.2163 | likely_benign | 0.2454 | benign | 0.172 | Stabilizing | 0.563 | D | 0.533 | neutral | None | None | None | None | N |
T/M | 0.1417 | likely_benign | 0.159 | benign | 0.151 | Stabilizing | 0.563 | D | 0.486 | neutral | None | None | None | None | N |
T/N | 0.4798 | ambiguous | 0.4983 | ambiguous | -1.526 | Destabilizing | 0.996 | D | 0.657 | prob.neutral | N | 0.474759225 | None | None | N |
T/P | 0.9539 | likely_pathogenic | 0.9453 | pathogenic | -0.145 | Destabilizing | 0.996 | D | 0.705 | prob.delet. | N | 0.476127042 | None | None | N |
T/Q | 0.6711 | likely_pathogenic | 0.6984 | pathogenic | -1.289 | Destabilizing | 0.99 | D | 0.691 | prob.delet. | None | None | None | None | N |
T/R | 0.7269 | likely_pathogenic | 0.7293 | pathogenic | -1.159 | Destabilizing | 0.99 | D | 0.704 | prob.delet. | None | None | None | None | N |
T/S | 0.3922 | ambiguous | 0.4047 | ambiguous | -1.607 | Destabilizing | 0.956 | D | 0.57 | neutral | N | 0.473744532 | None | None | N |
T/V | 0.2267 | likely_benign | 0.2828 | benign | -0.145 | Destabilizing | 0.075 | N | 0.215 | neutral | None | None | None | None | N |
T/W | 0.8095 | likely_pathogenic | 0.8414 | pathogenic | -0.704 | Destabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
T/Y | 0.4865 | ambiguous | 0.5605 | ambiguous | -0.334 | Destabilizing | 0.161 | N | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.